SimpleSearch - Line and FST details


Line specific information

 
Line ID 388E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N437202)
Segregation Analysis 68:15:14
Confirmed for Hit At5g65670
Parent of DUPLO pair none
Parent of pair(s) 6833

Gene hit At3g01660

 
Sequence (A. th genome BLAST matches underlined) 
>13-K018251-022-388-E02-8409
GATCATGAAATTTCCCGGACATGAAGCCTTTACATTGAATTACATAGGGAAGAGCAGAAA
TAATCACACCACTCATCAGTTATCCATTCCTTTCTTTTTACATAAATTTTGTCACTTTTT
CTACAAACGATTCTTCGCTTCTGTGAAATTTGATAAAGCGAAAGTTTTTTTCTTATGGAT
TCTCTTCGATTCAACCTCCAACAATCTCCATTTCAATTGAAACCTATGGGAT
GenBank Accession BX286086 [GenBank]
Graphic View Graphic view of gene At3g01660
Predicted Position of Insertion Chr3:245402 - go to primer design
BLAST e Value 7e-86
Hit Clone Code (BAC ID) F4P13
Hit Gene Code At3g01660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At5g65670

 
Sequence (A. th genome BLAST matches underlined) 
>13-K018255-022-388-E02-8409
TTCCGGACTGAAGCCATTTACTAGCAATTGCATCTCCGGAACACTCTAGGAGGACTTAAC
AGAGCATAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCTACTCTCTCTCC
CCTTGCTGAAGATGACAAAACTACTATCAGCCTCAAGGCTACGGAGCTGACACTTGGTCT
TCCTGGATCACAATCTCCTGCGAGAGACACAGAGCTTATCCTTTTGAGCCCAGCAGAGCT
ATCGGAGCTCCCCTTATAGTGGAGGAGTGATGACTGGCCAGGACGTCNGCCCGAAAGAGC
GACCAGGCAGATCACGCTTTTTCGAAAGCGGTCGGATTTGC
GenBank Accession BX286087 [GenBank]
Graphic View Graphic view of gene At5g65670
Predicted Position of Insertion Chr5:26254516 - go to primer design
BLAST e Value 7e-107
Hit Clone Code (BAC ID) K21L13
Hit Gene Code At5g65670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indole-3-acetic acid inducible 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37