SimpleSearch - Line and FST details


Line specific information

 
Line ID 388H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N437246)
Segregation Analysis 50:33:26
Confirmed for Hit At5g04220
Parent of DUPLO pair none
Parent of pair(s) 2801, 65352

Gene hit At5g04220

 
Sequence (A. th genome BLAST matches underlined) 
>80-K018255-022-388-H10-8409
TCTTAAGAGCTTCTCTTCAAATGCAGATTTAGAATTTTACCTTAGTTCTCTTCTTTTCTC
CTCTGAAGAGAACAACAGCATAAGGGTTCGAGTGTTTCTTCTTGCCCTCGACATCTTTTG
CAGATTGGACTGCAACCGAGAGTAGACCGGCTTGGCTGAGAAATCATCGTCCTCTGATGA
TTTCTCTTCTCTGCTCTCTTTTCTACGCTTAATGCTTTCTTCTCTGAATGGCACATACCT
GAGATCAACCTCTAATCTTCCTCTTTTTTTCTTGTCTCCAGAATCCATAACAACATTTGA
GTTCTTAATCAGATCAAGATTAAACTCCTTCCTCTCACCCGGGTTAATCTTTTGCAAAGG
GATCATCTGCATTCCTAATCTGTCGTGCCCACCGACCTATACAGATACAGAGCCGCTTTA
GTAAGAATGGCATAAAATGTTGAGCTATGGGATCCTCCCCTAATAGTGAGANGCNTGNAC
CTTGTCCCANTCAAAGACTTCTATGGGATCCTCCCCTATAGTGAGACCCCGACTTTAGAC
CTGCCACACCATGTTTTAAGAAAAAGTGAAAATGT
GenBank Accession BX286136 [GenBank]
Graphic View Graphic view of gene At5g04220
Predicted Position of Insertion Chr5:1156414 - go to primer design
BLAST e Value 2e-107
Hit Clone Code (BAC ID) F21E1
Hit Gene Code At5g04220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37