SimpleSearch - Line and FST details


Line specific information

 
Line ID 389A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N437250)
Segregation Analysis 50:49:49
Confirmed for Hit At1g34575
Parent of DUPLO pair none
Parent of pair(s) 6615, 6619, 10693, 10700, 10701, 82442, 82443, 82461, 82462, 82479, 82480, 82498, 82499, 82518, 82519, 82534, 82535, 82554, 82555, 82569, 82570, 82587, 82588, 82602, 82603, 82614, 82615, 82626, 82627, 82637, 82638, 82647, 82648, 82656, 82657, 82670, 82671, 82677, 82678, 82685, 82686, 82692, 82693, 82697, 82698, 82702, 82703, 82704, 82705, 82706, 82707

Gene hit At1g34575

 
Sequence (A. th genome BLAST matches underlined) 
>09-K017791-022-389-A02-8409
TTTCTGCGCGTAATGCTCATCTTGTCGGGATACTCCTCTGTTTCCGATTGTTTCAACGTT
AAAGACTGTAACTTTCTCCGGGACAGGAACTAGCTTGATCTTCCAAGCTAAGACAACACA
GAAGCTAGCGGCTCCACCGCCTCGTAAGGCCCAGAAAAGATCTTCTCCCATGGAACTCCG
GTCCAAGACTCTTGCGTTAGCATCAACAATCTTAGCGTCTATAATGTTATCAATCGATAA
ACCGTATTTCCTCATCATGTTTCCGTAACCTCCACCGCTAAAATGCCCACCAGCACCGAG
ACCGGGACAGATTCCAGCGGGGAAACCACGGAGGTTGTTGCTTTTATTGGCAACGTTGTA
GTAGATCTCTCCTATGGGATCCTCCCTAATAGTGA
GenBank Accession BX286141 [GenBank]
Graphic View Graphic view of gene At1g34575
Predicted Position of Insertion Chr1:12657935 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F12K21
Hit Gene Code At1g34575 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD-binding Berberine family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX286141 [GenBank]


Last Updated on 10.06.2021 13:37