SimpleSearch - Line and FST details


Line specific information

 
Line ID 390B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N437363)
Segregation Analysis 50:49:35
Confirmed for Hit At1g02400
Parent of DUPLO pair none
Parent of pair(s) 95890

Gene hit At1g02400

 
Sequence (A. th genome BLAST matches underlined) 
>50-K018262-022-390-B07-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATCAAATTGGAGACGTCAACGA
GTAAAGATTTGACTTGTTATTCCTCTTCGTCATTTTTAAAATGACAAGTTGTAAATAAAA
AGCAGGAATCATGGGGTCCTCACTTTCCGAACATTCCTCTGTCTCATGTCTTTTCTTTTT
CTGTTATTGGTATTTATCGTAATAATAATAATAATTTGAAAATCTTTCAGAAAAAATAAG
AACAACAACCCGTCTCTCTGTCAATTGTTGTTGAGTGTGTTAATAAATTCCACGTGTTGT
TTCTCTTTTATTAGCTCGGCGACGAATGATTACATACGCACGGTTAGAGATTTGGCATGT
GAGATCATTGATCTGACGATCGAGAATTTATGGGGACAGAAGCCTATGGGATCTCCCTTT
ATAGTGAGANNANGACACNCNNCNTTCTCTTCGGCTTCGTGCCCGAAATGATGCCCATGG
CGGACGCATCGGCAATATCATGCTGACCCGCTATGTGCCGACACCGCTAGTGCATACTCC
CCTATAGTTAGGGGTTAAGCTAATACAACGATGAATGATTTTGGAGACCTCTTTATCGAA
ATGGGATTTCGTTAGCGTCAAAATGGGGACCTACAATAAAAAATTCACCGAAGGGAGACG
CCATATTCCCCTCTTCCCCGAAAAGGGAAGAAACTCTCCTTATGTTTGGCAAGGAAACCC
CTGATTAGGGTCTGGGTGTCAATAGAGGAAAAAAACGCCGGGGCACCCAGGGCCGAATCA
AATAATGTCGGGGGGGCAACAGCGCCTGTAGATACAGAGAAAACAAAA
GenBank Accession BX286345 [GenBank]
Graphic View Graphic view of gene At1g02400
Predicted Position of Insertion Chr1:488447 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T6A9
Hit Gene Code At1g02400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation gibberellin 2-oxidase 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX286344 [GenBank]


Last Updated on 10.06.2021 13:37