SimpleSearch - Line and FST details


Line specific information

 
Line ID 390H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N437435)
Segregation Analysis 50:49:25
Confirmed for Hit At1g79640
Parent of DUPLO pair 2521
Parent of pair(s) none

Gene hit At1g79640

 
Sequence (A. th genome BLAST matches underlined) 
>56-K017793-022-390-H07-8409
GATCATGAGATTTCCCGGACATGAAGCCATTTACACTTGATTATTGCCGGAACGGCCTGA
CATTATGTTGCCTGTGATATGACTCGCCCTTGGAACCCTTCCCTATGGCACCCTCCCTGG
GATGAGCCACACTATGAGATCCTCCCTATAGTGAGATAAAAGACTTGCCGAGCGAAGTGA
AATCCAGAGAGGAGGAATAACTGACTATCACCTCCCGATGAATGTGGCCATGCTGATGGA
GATAGTCTAATCCCTTCAAAGCTTCACTCAATATAGTACCTATAATAGCTTCTTCAGAAC
CATCAGGATATGCAGCTTTTAGAATGTCAACACAAGAACCACCATACATGTATGGCATGA
TGACCCACAAATTGTGATCACTAACAAAGGAACAATGTGACTTCAACACATTGGGATGAT
CAACAAGCATCATCGTCTGCGCTTCACGAGAGATGTTGTTCTGCCCCCAAATCAATAAAA
AAAACGTAATCACTTTAGATACAATGCAAATTACAAAAACACAAAAAAAAATCCAGATTC
AGAGTCGGAGAACAAGAGAATATATATAATCACCAGATCGCAGTTATCGCGTTCAAAATC
AAGAATCTTAATAGCAACGACTTCATCAAACGGAATGCACAAAGCACGATGCACTATGGG
A
GenBank Accession BX286459 [GenBank]
Graphic View Graphic view of gene At1g79640
Predicted Position of Insertion Chr1:29970417 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F20B17
Hit Gene Code At1g79640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX286461 [GenBank] BX286459 [GenBank]


Last Updated on 10.06.2021 13:37