SimpleSearch - Line and FST details
Line specific information
| Line ID | 391E04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437492) |
| Segregation Analysis | 50:33:28 |
| Confirmed for Hit | At3g06190 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 8203, 8205, 11162, 83949, 83950 |
Gene hit At3g06190
| Sequence (A. th genome BLAST matches underlined) | >29-K018263-022-391-E04-8409 AATTACAGACAACTTTCTGTTACAAGGGCGGCCTTCGTATTTCAGACATGATCAAAGCGA TTCTAACAAGCAAGGAGTGATCTTCTGTACCTTTCAGGTTTTCTGGCAAAGCTATAAATT TGAGGCAGGCGGCTTTCACCTGGAAACAATGATGCTGCTCTGCAAGAGCCAAGGTGGTTG CTACCGTATTTATGCTGATTCCTTCACAGAATTTTGACTCGCATATTGTTCTAAGCCGCT CAAGAGCATAACGGTCTGCAGCTGCAAGCAGATGCTGAGCCACAAGAGTTGATGCCCATT TCAAGTCTGTGCCGATTAAGTCTTGCATATCAGGCATTTCATCCCAGTAGATAAAATGAA GCAACATCTGCAACAACAACAAAAAAGTACAATAAACCAAAAGGAAGGGAATTTGTATCA ACCTTAAATTTACAGGAGCCATGATCTAAAACTCGCACATCGACTAAAGACCAATCTTAA CAAAAAAAAGCAAAGCTGAAAAGCAGAAAAATTTGACATGAACATGATGATCTATAACAT AATTTCTCAATGGATTTACTGCATGCGGGAAATCGAGACATCATGCAATCCAAAGGAAAA GAAAAAGATAAACCCTTATCCCGGGGGAGGAATATTTGA |
| GenBank Accession | BX286529 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1874752 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F28L1 |
| Hit Gene Code | At3g06190 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | BTB-POZ and MATH domain 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g42380
| Sequence (A. th genome BLAST matches underlined) | >29-K018270-022-391-E04-8409 TGATCTGTAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGAATAATAGGCTTA TAGCTGAAGGTCACTATGCTCGCAGAAGACCAGTTGGTAAGAACAATAATCAGGGGAATA AAGGCAAGAATAGGTCTTGGTCTAAGTCTGCGGATGGTAAAAGAGTGTGTTGGATTTGTG GCAAGGAAAAGCACTTCAACGAGCAGTGTTATAAGTGGTTAGAAAGAAACAAACCAAAGT AGCAGGGTTCTGACAATGGAGAGTCAAGTTTGGCTAAGTCCAGTGGGAATCATGACCCTG CAATGCTGTCGATGGCCACTGAAGAGAACTTGGTAGCTACAGATAGCATTGCAGATGAAT GGGTGATAAGGTTCAAATTACCCTAAGAACTACTCTCTCAAATAAGAGATCAATTGCAGT ATTTAAGGATCGATTTCCACAAAGTTCTTTTGTTCAAACAATGAGTTGAATGTCGAGATT AAGCTATGGGAT |
| GenBank Accession | BX286530 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:15854439 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F7F22 |
| Hit Gene Code | At1g42380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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