SimpleSearch - Line and FST details


Line specific information

 
Line ID 392A09
Vector Used pAC161
Line Availability available as T3 set from NASC (N437545)
Segregation Analysis 100:100:79
Confirmed for Hit At3g20770
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g20770

 
Sequence (A. th genome BLAST matches underlined) 
>65-K018271-022-392-A09-8409
ATTTCCCGGACTTAAACTTTTATTGAATTCAAAGCCCCTTTTTTATAATTTAGGGTTTGA
TGATTTTTTTTAGTAAGTTGTTTGATTCAGAAGAAATATAATTGTACTGATTAGTTTTGT
TTGTGTATTTGATTTGTTACAGGTTACAATGATGTTTAATGAGATGGGAATGTGTGGAAA
CATGGATTTCTTCTCTTCTGGATCACTTGGTGAAGTTGATTTCTGTCCTGTTCCACAAGC
TGAGCCTGATTCCATTGTTGAAGATGACTATACTGATGATGAGATTGATGTTGATGAATT
GGAGAGGAGGATGTGGAGAGACAAAATGCGGCTTAAACGTCTCAAGGAGCAGGATAAGGG
TAAAGAAGGTGTTGATGCTGCTAAACAGAGGCAGTCTCAAGAGCAAGCTATGGGATCTCC
CNNATTGGTGAGAAGAANNNCNNTTTCANTNGNAGAGGANNTGGTACCCGGGGATCAGAT
TGTCGTTTCCCGCCGTCGGTTTAAACTATCAGTGTTTGACAGGATATATCGGCGGGTAAA
CCTAAGAGAAAAGAGCCGTTATAAAAATAATCGGATATTTTAAAGGGCGTGCAAAAGGTT
ATCCCGGCGTCCATTTGTATGTGGATGCCGACCACAGGGATACCCTCGGGAGTGCTTGGC
ATTCCCCGCCATAATAGACCTCTGTTCAAACCCCCAGACCTCGGAAAGCCTGAGCACGGA
ACATATTTCCCAAAGATCCCTTGGCTCGTCTGGGT
GenBank Accession BX286590 [GenBank]
Graphic View Graphic view of gene At3g20770
Predicted Position of Insertion Chr3:7262725 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MOE17
Hit Gene Code At3g20770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ethylene insensitive 3 family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37