SimpleSearch - Line and FST details


Line specific information

 
Line ID 392D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N437574)
Segregation Analysis 50:48:36
Confirmed for Hit At5g11250
Parent of DUPLO pair none
Parent of pair(s) 4343, 4399, 4402, 78619, 78620, 78630, 78632

Gene hit At5g11250

 
Sequence (A. th genome BLAST matches underlined) 
>12-K018271-022-392-D02-8409
GGATTCCGCTATGGGATCCTCCCTATACGCGAGAACTCAAGGGGTACAGAAAGGTGGTAT
CACTCCCACAGATTCCAGATTCTTTAAAATGGATTGATGCTGAAGATTGTGAGTCCTTGG
AGAGACTATATTGCTCCTTTCACAATCGCAGAGATTACTCTCTTCTTTGGTAAGTGCTTT
AAACTTAATCAAGAAGCAAGAGACCTAATCATCCAGACACCGACTAAACAAGCAGTCTTA
CCTGGTAGAGAGGTGCCTGCATACTTCACTCACCGAGCGAGTGGGGGTTCATTGACAATT
AAGTTGAATGAGAGGCCTCTTCCTACATCTATNAGATATAAGGCTTGCATCTTGCTATGG
GATCCTCCCTATAGTGAG
GenBank Accession BX286622 [GenBank]
Graphic View Graphic view of gene At5g11250
Predicted Position of Insertion Chr5:3588539 - go to primer design
BLAST e Value 1e-173
Hit Clone Code (BAC ID) F2I11
Hit Gene Code At5g11250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX286621 [GenBank]


Last Updated on 10.06.2021 13:37