SimpleSearch - Line and FST details
Line specific information
| Line ID | 393B07 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 8964 |
| Note | |
Gene hit At5g43830
| Sequence (A. th genome BLAST matches underlined) | >50-K018292-022-393-B07-8409 TATCATGTAGATTCCNGGACATGAGCCATTTACATTGAATATATCCTCGCAAATAATGGG CGGTTCGGTGTACAAACGCTCTATGGGATCCTCCCTATAGAGAGATGCGTCTAATATATC GCATTGACTAATAAACATTATCATGCTATCTCTCACTCTGACGCATTGCAGGTCAAGAAT CTAATTCATACCTGTAGGATCCTCCCCATATTGAGCCTACAGGAATTCATTATAGACCCC AGGGCATTTACACACTATTGTCCTCATACTTATCACCATTGCTCCATTATTTTCTAGGGT CTGCCAAACCATTTTCCCGACATACCTTCAGTGAGATACATGCTCGCTGTATATGAGAAT ACAGTCGGGAATAGCCCTGAAGCTTGTCAGATTCCACTGCTCATATGAGTCTGCTTTCAA ATTGACAGATGGATCTCTCGCTTCTCATTACGCTTCCGTGAATCACAACTCCGACGATGT TAACTGCAGATCATCTGGATTGGTTGCTTACTCTCTCGATAAACCTGATCCTCGTGTTCC TA |
| GenBank Accession | FR809449 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:17624520 - go to primer design |
| BLAST e Value | 1e-34 |
| Hit Clone Code (BAC ID) | MQD19 |
| Hit Gene Code | At5g43830 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | aluminum induced protein with YGL and LRDR motifs |
| Insertion Classification | Promoter |
| Confirmation Status | failed, line belongs to a contamination group, please check line 393A08 |
Gene hit At3g21220
| Sequence (A. th genome BLAST matches underlined) | >50-K018296-022-393-B07-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATAGAATCCACACTCCGACGTCACGT CCTTTCGCTCTCAAAGTGATTTACGGAAACCACGAAGATACCGTGAGACGTCTGATCTGT AGAGAGATCGAGATCTTAAGAAGTGTTGATCATCCAAACGTTGTGAAATGTCACGATATG TTTGATCATAACGGTGAGATCCAGGTTTTGCTTGAGTTTATGGATCAAGGATCTCTTGAA GGAGCTCATATATGGCAAGAACAGGGAATTAGCTGATCTCTCTCGTCAGATTCTTAGTGG ATTAGCTTATCTTCATCGTCGTCATATCGTTCATCGTGATATCAAACCTTCGAATCTTCT TATAAACTCAGCTAAAAATGTGAAAATTGCTGATTTTGGTGTGAGTAGGATCTTGGCACA AACAATGGATCCTTGTAATTCATCTGTTGGTACTATTGCTTATATGAGTCCTGAGAGGAT TAATACTGATTTGAATCATGGTCGTTACGATGGTTATGCTGGAGATGTTTGGAAGTTTAG GTGTTAGTATCTTGGAGTTTACTTGGGGGAGGTTTCCTTTTGCTGTGAGTAACNAGGTGA TTGGGCTAT |
| GenBank Accession | BX286705 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:7446177 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MXL8 |
| Hit Gene Code | At3g21220 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | MAP kinase kinase 5 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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