SimpleSearch - Line and FST details


Line specific information

 
Line ID 394A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N437733)
Segregation Analysis 50:44:39
Confirmed for Hit At1g52900
Parent of DUPLO pair none
Parent of pair(s) 11951

Gene hit At1g52900

 
Sequence (A. th genome BLAST matches underlined) 
>33-K018293-022-394-A05-8409
ATTTCCCGGACTGAAGCATATTGATCCTCTAACTCGACCAATCTCTCGACGATAACATCC
GATGCAACTGTAACAACCTCCGATAAATTCCTAAATAAATGAATGTTGAGTTAAATCAGA
AACTGAATAAACAAAAGTACAATAATAATAAAACAGAGATAGTTAATAAAAAGATTTGAT
AGAAAAAATAAATTACCCTTTGTAGGAATCAAACGTGAGTCCAACGATATCTTTAGCTTC
TTGAAGGGCCCATCTAAACCTTTGGATTTCATCATCAGAACATGTCACCCTCTCGATCAT
AACATCGAGTTGTGAAGGTTTGATGTCGCAGAATATCGGTATGACCCTTTTTCTGGACTC
CATTATAAGAGCAAGCTCGTGCAGACAGAAATATGAATCGCAGTAGTTAGGAGAAAAAAC
CGTTACAGCGACTTTAGAAGTGAGAATCGCGTTGTTGATATGATCAAAAAGCTTATCTCC
GGGCTTCATGTTCTTGGAATCCAAGAATGGACGTAAGTTACGAGATTTGAGATTGTCATA
AAGCAATGTTGCGATGTTTCTCTTTGTGTCGGATCCTCTGTGGTTGATGAACACGTCGTG
CAAAATTTTGGGTTTGGCCGATGACTAGGAAGAGAGGAGATCGAGAAATAGTTTGTTGGT
TAACTGAACTGTTTCGGATTGTTTCATGAAGTTGAAAACCCTATGGATCCCCCCCC
GenBank Accession BX286788 [GenBank]
Graphic View Graphic view of gene At1g52900
Predicted Position of Insertion Chr1:19702255 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14G24
Hit Gene Code At1g52900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Toll-Interleukin-Resistance (TIR) domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37