SimpleSearch - Line and FST details


Line specific information

 
Line ID 394C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N437753)
Segregation Analysis 50:50:43
Confirmed for Hit At2g37975
Parent of DUPLO pair none
Parent of pair(s) 12322

Gene hit At4g22820

 
Sequence (A. th genome BLAST matches underlined) 
>03-K018297-022-394-C01-8409
TTATCATGTAGATTTCCCGGACATGAAGCCATTTACAATGGAAGGACATGAAATCATGTA
GATTTCCATTTACATGAAGCTATCTTAAACGAAGACCGTTTTCTATGGGATCCTCCCTAT
AGTGAGACTATGGAACCCTCGATATTTGAAGACTGAGGGAACATCGCTAAGTGTTAACCA
TGGGAAGGCAACCATCGACCGACTATTCACTTCGCTTTCCCCCGAAGTGACTTTCCCATT
TTAAAGTCTCAATAACAAATCCGCGTAATATACACGCAAAACCTACCACTGGGAGTTTAA
AATGACAGAGATACTCGTCGACCTCCCTATTATGAAGATGGGAGCATTGCGAAATCTTAT
AACACTTCAAAATTATACAGACATTCATAACAATAAAGATATACATGAACCAACGATAAC
ACTCGGCCTTTTATCTTCGAAAAAAAGTCATGTTTCCTAAGTGAGCTAACTAATTTATGT
CTTGGTATAACATACCAATGTTACATGAATATATNAATTTGAACTTGGCATATATATAAG
AGTTTTATCTTATTTGATCAACATGATAGCATATTGGGCCCCATATCGGCCTAAATATAT
AAATATATTTTTGGGCCTGGAATTTTGGTCTGTACATGTAAAGCCCACATGTAAGATTGA
GGATATATAAAACTCGATTCTATTAAATAATACTATACAGTATTTGCTAT
GenBank Accession BX286814 [GenBank]
Graphic View Graphic view of gene At4g22820
Predicted Position of Insertion Chr4:11987685 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T12H17
Hit Gene Code At4g22820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation A20/AN1-like zinc finger family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g37975

 
Sequence (A. th genome BLAST matches underlined) 
>03-K018293-022-394-C01-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATAGTAGCAATCCTTCCATT
AGTGTCCAGAACCCCATGATTTCTCTGTGGAAACTGGAGAGGATAGAAAACAATCAAGAC
TTATGCGGCAAGAGTGGTAACATATACTCTTGGTAACATACAGTGTTAAGTAAACATGGA
ACATTTGTGGTACTATATGCAAGTGATCAAGCTTTTGAATAATTGGTGTTCTGAAAGATA
GAGAACTCTTAGCTTAACTTTGTATCTAAAAGTTCTCAGAAGAAAGCAAAGAAGGTAGTA
AGGCAACATCTTGAATCTAACACATTAATAAACAAGAACCGATTGCAATACTACTATAAA
GCTTTACAGTGATCAGGGCAGGTCCTATGGGATC
GenBank Accession BX286813 [GenBank]
Graphic View Graphic view of gene At2g37975
Predicted Position of Insertion Chr2:15892100 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T8P21
Hit Gene Code At2g37975 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Yos1-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37