SimpleSearch - Line and FST details


Line specific information

 
Line ID 394H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N437815)
Segregation Analysis 50:49:39
Confirmed for Hit At1g77410
Parent of DUPLO pair none
Parent of pair(s) 3666, 3734, 3835, 81533, 81536, 81538
Note

Gene hit At1g77410

 
Sequence (A. th genome BLAST matches underlined) 
>24-K018297-022-394-H03-8409
TTTCCCGGACTGAAGCCTTTACATTGAATATATTGTATGAGCTTACCTTGGCAGTGTTGA
AGGCTACATTCTTGCAGTCTGGCAGGACACTTACAGATTTTGGAGACAAACGATATGAAG
AATTACGAAACTGTACAGTAGACTCGCATTTGTCTTGATTCACCAGAATGGCAGCGCATA
GGTTCGCCTTCTTCCCAAACACAAAAGCCTGTTAAATAAGACGTAAAGATCACTATTACA
ACATTCTTCACGAATTTTTTTTGTGTAACTGACCGAAAAACAATTTTGAAAAGTTGACAC
ACGTTGAAGCTATGGGATCCTCCGTAATAGTGAGAGTGTTCGCTAAGACAATGAACAATG
ATGCAGAGAACAAAAGAAAGCAAGCTATGGGATCCTCCCTTATAGTGAGANNNAANGNTN
GNGNNNNNNGNNCNNCCTTCTTNCTCGCGCCCCTAACCGGGGAAAGGTGACACACAGATC
ACCATTACCCGAGACCTCCCGGATCAATTGGGCGGCACATCCCGGAAAATGAGTGGTTAA
AGAGGAAATTGGCTGACTACAAGCTGGGACTCCCNAATTCCAAGGGGGNTTCGTTTTNCA
GTCTAGCGGGGGTTTATAAACCAAAAACTTTAT
GenBank Accession BX286890 [GenBank]
Graphic View Graphic view of gene At1g77410
Predicted Position of Insertion Chr1:29090698 - go to primer design
BLAST e Value 2e-119
Hit Clone Code (BAC ID) F2P24
Hit Gene Code At1g77410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-galactosidase 16
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g34630

 
Sequence (A. th genome BLAST matches underlined) 
>24-K018293-022-394-H03-8409
CACGCTGCGAGGGGGGGGCTCTTATTAAAGACCTTACAACTGGTGGCACGCTCCCGCTTC
TTCGCGGGTGTCTTTATCACTATCCCCGTGGGGGATTGCATGAGAATATTCATAATCTGC
GCCGAGAAATATCATCCGCTGCTGAGACCATCCAAGATCATTCTCATCAACTTCATCGCG
AACGACATCATCGCCAACATCATCATCACCATCCAGATCCACGGCGAGATCACCACCGTG
AGCAATAGGAATTATCTCATGCCGCGGAGACATGACAGAGGGTGCGACGAAGGAAGCGTC
GCCAAGAGATATGACGTCATCGACGCGAAAGACTATCAACGGGCACAGAATCCGCCGGAA
AACTCACCGTCGGAAGGATTATCAACTTCCCCAACATCGAGATGCACTTCTTGATCGATA
ATGAAAGGAGAC
GenBank Accession BX286889 [GenBank]
Graphic View Graphic view of gene At4g34630
Predicted Position of Insertion Chr4:16537125 - go to primer design
BLAST e Value 4e-56
Hit Clone Code (BAC ID) T4L20
Hit Gene Code At4g34630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation prostatic spermine-binding-like protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 394G03


Last Updated on 10.06.2021 13:37