SimpleSearch - Line and FST details


Line specific information

 
Line ID 395G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N437897)
Segregation Analysis 50:50:43
Confirmed for Hit At1g73190
Parent of DUPLO pair none
Parent of pair(s) 5740, 5750, 7580, 7651, 89425, 89426

Gene hit At1g73190

 
Sequence (A. th genome BLAST matches underlined) 
>07-K018298-022-395-G01-8409
TGATCTGANATTTCCCGGACATGNAGCCATTTACATCTGATATATCAGTGGTCATGCCAT
CTCCATCCCACCAACGCTGGACACAAAAGCTCTATGGGATCCTCCCTATAGCGAGACTAT
TAGGCTCCTACCCTATCTAGGGGATCCTCCCATATGGAGCGCCCCTTTGAACGTGCCTGT
ATACACACTATTTACAATTCCCTATAATTCGACCTCTTGAGAGTACCTATACTACGCCCC
CTGTGAGAAAGAGCTCTAATACGAGTCCATTATCCGCTCCGGCACCTGAGGTTGGAGGAT
CCTCCTTATGGGGAGATGCTCTCCTCGACCCAAATTTGTTGCTATGGTATCCTCCCTATA
GTGAGAAANCTGACTCCGCTCTTGAGGGTTACCCACTCTGGCACGAAGAAGAAACTTACA
CTTTGAACACTGCTCATCGTTATGGGGGCCGATTGATTTATCCATATGCTATGGGATCCT
CCCTAGGGCGAGGAATTNGGCCTCCCGGCCGGATGGTTGGCGCCTCGTCCGACATCCACG
ACNTCTGGACCGACTCGCAGCATTTCGATGGCCAAGGAGGACGCGCCCGGGGGGGGTTTT
TGGGATCCTCCCGTAAACNAAGGAAAACAGGGGANGNGATAAAGAGCCAACACCCATCTC
ACCTATCGCCACGCGGCGCCAATCATAACATATATAAGTACGGGAGGACAGTACGCCCAG
CCCCCCCTTCGCGTTAGGTGACCTGCGCCGACGCGAAACGACGGAGGAGAGCGGGGGCGG
CGGGTGGGTCGTCCCCCCCGGGGAGGGCTTTATTGTCACGAGGGTGTGGCGGAGTGGTGG
TGGATGGAGGATTG
GenBank Accession BX286949 [GenBank]
Graphic View Graphic view of gene At1g73190
Predicted Position of Insertion Chr1:27523038 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) T18K17
Hit Gene Code At1g73190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Aquaporin-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37