SimpleSearch - Line and FST details
Line specific information
| Line ID | 395G08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437904) |
| Segregation Analysis | 50:50:47 |
| Confirmed for Hit | At3g49870 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3401, 3525, 10846 |
Gene hit F14O13
| Sequence (A. th genome BLAST matches underlined) | >63-K018298-022-395-G08-8409 TGATCTGTAATTTCCNGGACATGAGCCATTTACAATTGAATCGTGTTGCACCAAATTACA TCACCGTTATCAGCTCAATAGTATTTGAATCGTGGTCTATTTTCTTATCGCGGGCTATAG GATCCTCCCTATAGTGAGAAAAATTATTATTTACTTACAAAAAAACAAATATTTGTTTAT ATTTTTCAAAAATTGCATAACATATGTGGGGTGCAAATCACATTTATTTACTCAAACTAC TGCGGAAAAGATGGCATACCATCTCGAGATATAATAATTTTGAGCTATGGGATCCTCCCT ATAGTGAGAGTGGGGGTT |
| GenBank Accession | BX286961 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:8598895 - go to primer design |
| BLAST e Value | 3e-51 |
| Hit Clone Code (BAC ID) | F14O13 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g49870
| Sequence (A. th genome BLAST matches underlined) | >63-K018294-022-395-G08-8409 ATGAGCCATTACATTAGAATCGTGTTGCAACCAAATTACATCACCGTTATCAGCTCAATA GTATTTGAATCGTGGCCTATGGCATCCTTCTTATAGTGAGAGANAAGAGGANNGANTNTC CCCTNTTTTTTTGCATTCTGACATCTGCGATTTTGGAGAGGGAAAAATAAGGGGAATACA CTTTTTGTTTATACGACGAGACAATATCACTCATTGTTGTTGGCGGAAGATATACCGGGA TTAGTCTCATTCGGAAATGTTATTTTCGAGGGGCCTACTTACAGGGCCGAATGGGGGTTA ATATCAGAAAATTCCCGATCTAGGCCTTCATCCCTATTTGGGAGGGGCACCCATGGGAGG GTAANTATAGAGAGAGAAGGCCTTGTGAGGTTCGGACACCGGCCCATAATTGAAAATGGT TAGAACGGGTAACACCCCAAAGGAGAGATAAAAGCACCAAGCGAGGACGACAGAGAGAAA AGAAGCAGGACGCGCACGGGCCGGGCCTTCAACGGGGGAAGCGGCGGAAGAGACAAGGCG AACGGGAGATAAGAGAAGCGGAGGGGGCGCAAGCAGGAGCAGCCAGCAAGGGCGAGAGAG GAGCCCAAGGGCGGATGACGCGGGCCCGGAGGGAAACAAACAGAGGGAGAGGGGGGGACA CCGAGGAGGGGGAGGAAGAGGCACCCGCGCCGCGGAGCACTAGCCGCTGATGAAGGCGGT CAAGGAGCCATGAGCAGGGAACGGAAGCGCGAGAGCCGGTGACCATCAACAAGAGGGGCA |
| GenBank Accession | BX286960 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:18493941 - go to primer design |
| BLAST e Value | 2e-24 |
| Hit Clone Code (BAC ID) | T16K5 |
| Hit Gene Code | At3g49870 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ADP-ribosylation factor-like A1C |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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