SimpleSearch - Line and FST details


Line specific information

 
Line ID 396C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N437954)
Segregation Analysis 50:50:47
Confirmed for Hit At5g67260
Parent of DUPLO pair none
Parent of pair(s) 6941, 8076

Gene hit At5g67260

 
Sequence (A. th genome BLAST matches underlined) 
>75-K017796-022-396-C10-8409
TCTGCCTATGGGATCCTCCCTATAGTGAGANGNNNNNNNNNNNNNNTTNNCNNNTTTTTT
TTTTTTACNANTTGTNTATGTCCNNNCTCCTTCTTCTACCTTNCNNNNNTTTTCTCCTTT
CNCCCTNTTCTCTTCTTCNCNCTTCTTCTCTGCTCCNNCATTNCCTTCTCCNNTCATCTT
CTCTTCCTNCTATAAACTGTTCTTCAACCACAATCCAATCATGAACATTATGATGAATTA
GTTAGATCACGACAGGCCAGGTGGAGTATTATACTTTGATGACAACTCAAATAGCTCCTG
TAATGTCTCCACTACTGCTTCAATGACCTCATCATCTTCGACTCCAGAGCCTCTGCTCAA
GACAAGAAGAGTTCACGAGCAGCACATGAAATTGCCCTCCATAAACCGTATGTTTCTCGA
TGTGCTTAATACCCCTCACTAAGAGATCCCCCGCATAACCGCGGCCCAAACCTATACCCC
ACCTTCCTTTTTGGCCACTGACAATAGAGCATCGGTCCAACAATCCAAAAGAAAAAC
GenBank Accession FR809505 [GenBank]
Graphic View Graphic view of gene At5g67260
Predicted Position of Insertion Chr5:26837175 - go to primer design
BLAST e Value 3e-66
Hit Clone Code (BAC ID) K21H1
Hit Gene Code At5g67260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CYCLIN D3;2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809505 [GenBank]


Last Updated on 10.06.2021 13:37