SimpleSearch - Line and FST details


Line specific information

 
Line ID 396E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N437974)
Segregation Analysis 50:50:37
Confirmed for Hit At1g23790
Parent of DUPLO pair 12501
Parent of pair(s) none

Gene hit At1g23790

 
Sequence (A. th genome BLAST matches underlined) 
>45-K018295-022-396-E06-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATAGGGACAATGAGCATC
TCATTCTTGATTGGAGTCATTGTAAGAGTAATGGATCGTCTGCGTTTGAATCGCTCTTAT
GGATGAGATTAGGGAGAACCCCTGACATATCCAACTCTTAGCGAGGCACACAAGCTGATT
GTCCAGCTGCTTGCTTCCACAAGTTCTTGGAGTTTCACAGCCAGATATCTGAAACCATGA
ACGAAATTGCTTCTATCGAAGCAGCTGCTTCACCTGCTACTACTGAAAAAAAATCTGAGG
ATGGATCATTAATACTACACGAAATCCAGCATAACTCTCTTGATCAGGAGAAAACAACAT
CATAGAGAAGAATTCTCCTGAAGCAGCAGCCTAAGAGATCAAACGATGAGAACAAGAACC
CCGCAGTTTCTCTTTCCGGATTAGGAAACACGGCGAGGTTGGTTAAAGAGATAGAGAAAG
AAGCTGCAAATTGGTTCATGGAGTTTATAGAAAAGGCTCTGGAGAAAGGGATGAATAAAT
GTAAAGGCACAAGTGATGCATATGTTAAGAAAGTTCCACAGTCTCTGATTCTCCCGGTTG
TAGACTGGGTGGGAAGAAGAACATTCTGCTGATAACACGAAACGACCAGTTCATCCAAAA
GCATCACATATCACTATGGG
GenBank Accession BX287047 [GenBank]
Graphic View Graphic view of gene At1g23790
Predicted Position of Insertion Chr1:8411269 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5O8
Hit Gene Code At1g23790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation dicer-like protein (DUF936)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287047 [GenBank]


Last Updated on 10.06.2021 13:37