SimpleSearch - Line and FST details


Line specific information

 
Line ID 397B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N438033)
Segregation Analysis 50:49:46
Confirmed for Hit At1g58310
Parent of DUPLO pair none
Parent of pair(s) 89791, 89803, 89824, 89833, 89842, 89844, 89847, 89848, 89849

Gene hit At1g58310

 
Sequence (A. th genome BLAST matches underlined) 
>34-K017930-022-397-B05-8409
TATCATGTAATTTCCCGGACATGAAGCCATTTAAATTGTCCATGTCGGGCCTTCTCAAGA
ATTCTCCAAATCTGGAAACTCTTGTCTTTAAAGTATGAAACAAACCCTTTCAAGCATTTG
TTGACATATTTTTCAAAGTTTGAGATGTTTCTCCCACATTTCAGGGACTTGTCCACCGTT
TCACGGATAAATGTGGAGATATGTGTTTATGCAAACCTTGGGAGGAGGATGAAGAAGAGG
AGGAAGACGAGGAGACTCCTACTTGCTTATCATCATGTCCAGTGAAAGTGCTGAAGATAT
TGGAATTTGGTAAAATCTATGATGACGAGATAGAGAAGAGGATAGACCAAGTCAAGCATT
TTCTATGGGATCCTCCCGTATAGTGAGAGAGAAAAAGACAGACCTATTACCAATTTTTTT
TCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAA
ACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTC
GGAAATCTTTATTTCAACGTGTCTACATTTCCGTCCAAATGGGGGCTTAAATGAAAAACT
TCACGATCGATGCCTTGATTTCCCCCTTCCAAGA
GenBank Accession BX287125 [GenBank]
Graphic View Graphic view of gene At1g58310
Predicted Position of Insertion Chr1:21633134 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F19C14
Hit Gene Code At1g58310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37