SimpleSearch - Line and FST details


Line specific information

 
Line ID 399G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N438284)
Segregation Analysis 50:32:29
Confirmed for Hit At4g33320
Parent of DUPLO pair none
Parent of pair(s) 11888

Gene hit At4g33320

 
Sequence (A. th genome BLAST matches underlined) 
>31-K017893-022-399-G04-8409
CAACAATTACAAAACTTTTTGACAAGCATATAAACGAACGTTGGAATCAGGGTTTGTACC
TATGGGATTCTTCTTATAGTGAGANNNAANNNNAANNANNNNTTCCCCTTTTTTTTTCTT
TTCAAAAGGGTAGATGTCCGCCGCGTTATTATAAAAAGAAAGAACATTTTGATAAAACGA
CAAATTACGACCCGCCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAA
ATCTTTATTTCGACGGGTCTCCTTTCCCGTCCAAAGGGGGGCTTAAATGAGAAACTTCCC
GATCGATGCCTTGATTTCGCCATTCCCA
GenBank Accession BX287353 [GenBank]
Graphic View Graphic view of gene At4g33320
Predicted Position of Insertion Chr4:16057055 - go to primer design
BLAST e Value 1e-22
Hit Clone Code (BAC ID) F17M5
Hit Gene Code At4g33320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myosin-4 protein (DUF641)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g18200

 
Sequence (A. th genome BLAST matches underlined) 
>31-K017932-022-399-G04-8409
TTGCAGGAATGAAGCCATTTACAATTGTCTGTGTGACATCGATTGCTTATAAAGATTTTC
TTCTGCGCGTGATCTATTTTCCTAATCATCATTCCAATCCCAAATTTCATTCATTATTTT
TTTGTTATTTATCTATGGGATCCTCCCTATAGTGAGAAGAAAAAGAAAGAGAATTACCAA
TTTTTTTTACATTCAAAAATGTAGATGTGCGCAGCGTTATTATTAAATGAAAGTACATTT
TGAGGAAACGACAAATTACGATCCGTTCGTATTTATAAGCGAAAGATTTAAACAAGTTAT
TCTAATTCGGAAATCGGGAGTTCAAAGGGGAAACATTCACATCCAAGTGGGGGTTTAGAT
GAGAAACTTCACGATCGATGCCTTGATTGCGCCATTCC
GenBank Accession BX287354 [GenBank]
Graphic View Graphic view of gene At1g18200
Predicted Position of Insertion Chr1:6266069 - go to primer design
BLAST e Value 4e-41
Hit Clone Code (BAC ID) T10F20
Hit Gene Code At1g18200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Rab GTPase-like A1I protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37