SimpleSearch - Line and FST details


Line specific information

 
Line ID 401D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N438446)
Segregation Analysis 50:50:48
Confirmed for Hit At3g16870
Parent of DUPLO pair 12134
Parent of pair(s) none

Gene hit At3g16870

 
Sequence (A. th genome BLAST matches underlined) 
>76-K018290-022-401-D10-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTTCTTTTTCTTCGGCTGTGCGCTGGCCAGA
CAGTTATGCACAGGCCAGGCGGGTTTTAAGAGTTTTAATAAGTTTTAAAGAGTTTTAGGC
GGAAAAATCGCCTTTTTTCTCTTTTATATCAGTCACTTACATGTGTGACCGGTTCCCAAT
GTACGGCTATGGGATCTCCACTATAGTGAGAGCTNGNNATTGCNNATTTTCNGATCATCA
TCGATGTCNATCTTGCCATCATCAACTATGTTGATTTTGTATTTCTTGGCGTTTCGATGG
TCGAGGTTTAGATCATTATTGCAATTGCTTTTTCTGTTCTTCTTCTTCTCCTCTGATCTC
ATACCAAGTGCTGCTTGTCTCTTCTTCCTACTCTTGATCCCACAAGCATTGCACAATGAC
TACGTAGCAGAAGACAAACCACAGAAATAAGAAAAATTTGAACTTCAGAGCAATATGAGA
TCAGATCTTTCCGGTCACTAAATTGATTCATCACCTAAATAAATTTGAAAAACGATAAAA
CCTAAGATAGGATCATGCATAATATAGATGCTATTTCGCGATCCATTGATTAGATCT
GenBank Accession BX287428 [GenBank]
Graphic View Graphic view of gene At3g16870
Predicted Position of Insertion Chr3:5763935 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MUH15
Hit Gene Code At3g16870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GATA transcription factor 17
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287428 [GenBank]


Last Updated on 10.06.2021 13:37