SimpleSearch - Line and FST details


Line specific information

 
Line ID 401D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N438448)
Segregation Analysis 50:50:49
Confirmed for Hit At2g39480
Parent of DUPLO pair 2272
Parent of pair(s) none

Gene hit At2g39480

 
Sequence (A. th genome BLAST matches underlined) 
>92-K018291-022-401-D12-8409
TGATCTGANATTTCCCGGACATGAAGCCTTTACAATTGATATATCCTGATCTGCGGAATA
CTTAGCCGCTAAGAGATCCTCCCAAATGATGAAGATCGTTCATCCTCTGGGACTAATCAA
GAGGGAATTATTTTGTCTGCTGTCCAAGGAAATATTGAGTTTCGGAATGTATATTTCAGC
TATTTGTCACGACCTGAAATTCCAATCTTGAGTGGATTTTACCTTACTGTGCCGGCTAAA
AAAGCTGTTGCACTTGTTGGTAGAAATGGTTCTGGAAAAAGCAGTATCATTCCTCTNATG
GAACGGTTTTATGATCCTACACTATGGGATCCTCCCCTATAGTG
GenBank Accession BX287433 [GenBank]
Graphic View Graphic view of gene At2g39480
Predicted Position of Insertion Chr2:16482087 - go to primer design
BLAST e Value 1e-124
Hit Clone Code (BAC ID) F12L6
Hit Gene Code At2g39480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-glycoprotein 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287432 [GenBank]


Last Updated on 10.06.2021 13:37