SimpleSearch - Line and FST details


Line specific information

 
Line ID 402D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N438535)
Segregation Analysis 50:46:42
Confirmed for Hit At2g04390
Parent of DUPLO pair none
Parent of pair(s) 69007, 97345, 97346

Gene hit At2g04390

 
Sequence (A. th genome BLAST matches underlined) 
>20-K017817-022-402-D03-8409
TGATCTGTAGATTCCTGGACATGAGCATTTACAATTGATATATTCTGCCGCCGCACGCAG
GGATTGGTGCCATAGCTTGTTGTGGGTCGACTGCAGAGATGCCGAGAGTGTCAGACATTC
CTATGGGATCTNCCGTATAGTGAGTATTGGGTCCCAATGTACTTGCTATCCTCTGGAAAG
AGACCTTTTCGACCTTTTTCCCCCACTATGGGATCCTCCCTATAGTGAGACACCCAACAA
GAAGTTACGATCCGTCGTATTTATAGGCAAAAGCAATAAACAAATTATTCTAATTCGGAA
ATCTTTATTTCGACGGGTCTACTTTCACGTCCAAATGGGGGCTTAAATGAAAAATTTCAA
GATCGATGTTTTGTTTTCCCCCCCCCCCAGAAGNCNNTGGGTTCNNAATTATATGGGAGG
GTCCCCCCAAAATAAAAACCGTTCCCGGGGGCGGGCGGGTTTACGCTACCACCAAAGGGA
AGCCCAGCGGGGGGCGCACGCGCCGCGCCCCCGTCTTCNGGGNCGAAATAACGTGCGCCC
GGCTGAGGGACGGAGACACTGGGAAAGGACAACTAANGCATTTATGCAAAATTTTCTCCT
AACCCCCCCTTTGGGCGGGAAGGGGGCCCCCCAAAAAAAAACATCCAAATAGAAAAACCT
GGTTTCGGGTCGCCCCTTCGAACCACGGGACCCGATTTGCTCCTTATAAGATGGCTCTTC
TTTTTTAAAAGCGCGCCGACACCCCCTTTCTGAATTAAAAAAAAACGGGGCCCCCTTTTT
GTTTCCCCTCC
GenBank Accession BX287529 [GenBank]
Graphic View Graphic view of gene At2g04390
Predicted Position of Insertion Chr2:1528312 - go to primer design
BLAST e Value 5e-31
Hit Clone Code (BAC ID) T1O3
Hit Gene Code At2g04390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal S17 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37