SimpleSearch - Line and FST details


Line specific information

 
Line ID 403D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N438639)
Segregation Analysis 50:50:49
Confirmed for Hit At3g58110
Parent of DUPLO pair 12451
Parent of pair(s) none

Gene hit At3g58110

 
Sequence (A. th genome BLAST matches underlined) 
>84-K017818-022-403-D11-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGCTATGCATATG
ATTGAATTATGTAAGCCATTTACAAGCCATTTACAATTGAATATAGCCATTTACATGTAG
TTGATTCATTGCCTTTTTTTCCAAATGGTGATTCCCTCCAGGGAGTTGGCCAAGGGAATC
TCATGTTGGGAGATGCATCTCCGTTAGGTTACAACTCTGGGTTACAAATTCATGGCAATT
CAATTGGTGGTGATTTCCTTGCTCCTATGGGATCCTCCCCTATAGTGAGAGNANAGCTGC
NNCTNGATCCCTCANCGCNGTCNCAGGACGTAATGCAACGACGAAAAATCCTCGATCACA
AATCCGACGCTGTCTAAAAACGCGATCTGATTGTCGCTCTTTCGGCCGACTTCCTGGCCA
GTCATCACACTCCACAGTTCCGTCACAGGATGATCTGCGAGCGAGTTGCTGGATCTCGCC
TTCGGGGCGGGTCTGTGAGCGGGAACTCCACGAAAATATCCGAACGCAGCAAGATATCGC
AGGTGCATCTCGGGTCTTGACCTGGGCAGACGCCGCCAGACGCCTGTTGACTGTGGACGC
ACGGGCCCAATCATATTGTCAGCTTCATGATCCTGGCCGCTGTGCTTGTCGGCCAGTTGC
TGTCGTAATGATATCGGCCACCTTCGAACGCCCTGGTCCGCAGAGGCGCAGGGCCTCGAT
CTGAAACCCTAACCGGTGGAAAATTGCGGGAGGAGACCACAAGTACCCCCGGGGTCGATG
TTCTAGAGTCGAATCCGATCGGACGCCAAACAGAACCCTTGAAGGCAAAGGCTGGAACTC
CCTTTGGGACCGGCTCCGGATCTTGGCCATCCTGCCGCGAATGTTCACCGGCCAAAATCT
TTTGCCN
GenBank Accession BX287641 [GenBank]
Graphic View Graphic view of gene At3g58110
Predicted Position of Insertion Chr3:21518124 - go to primer design
BLAST e Value 3e-63
Hit Clone Code (BAC ID) F9D24
Hit Gene Code At3g58110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37