SimpleSearch - Line and FST details
Line specific information
Line ID | 404F07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N438755) |
Segregation Analysis | 50:48:47 |
Confirmed for Hit | At5g03840 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g03840
Sequence (A. th genome BLAST matches underlined) | >54-K017819-022-404-F07-8409 TGATCTGTAGATTCCNGGACATGAGCATTTACAATTGATATATCCTGGTTTGCCGAGACA TATTTTATCGCAGCGAAGAGAAACCGCTGCACGCAAACACTATGGGATCCTCCCTATAGT GAGCTCCATGACCTGTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTATGGGATCCTCCCTA TAGTGAGANNANNNNNNNCNNNNANGNNCCNNNNGNNNAGGAGTGAATAAAATGGGACAC TGTGCGCAGAGGCATGAGCGGCGATAGGATAAACTTTATCGCAATGATGGCATTTGTAAG ATCCGACTTCATTTTCCGCTAGGGTGCACATAAAGAGACAGATAGGTGGGCCACGGAATC AGAGGAGGACTTCAGATATGACCCTCTGCTGAGAAGGGCTCCATGACCTTAGGGCCTAAA AAAAAAGAAGCCTTGACGCACATGGAGGGAAAAAGGGGGGGGGGGCTCCACCAAGTTAAC AAAGACTCCCTTATTGTCAATGAAACGCAGAACGACTATTTTTATATTGCCCCACACCCA ACCACATAAAATTGCCGCCCGGGGCGCTCTATATAAAATCATAAACGCGGGACCAAATGC GGGATCATAAAAGGTGACCACCCAAAAAGAGGGGCAGGGCCTAGAGAGATATTATAAGAA GGAGGAAAAAATGGGGAAATCAACAGGGGAAAGCGGTAACCCAGCAGAAATAACACCCCG CGCCCGAAGAAGATAAGATGGGAAAAAAGAAGAGCAGACAGGACAGAGAAACAGATAGAA AGAGTAATGAGACAAAGACGGGACCGCCCCAGCAGAGCACAAGGAGAGGCTGAGAATGGA GGAGAAAAACAGAGACGGA |
GenBank Accession | FR809672 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:1024804 - go to primer design |
BLAST e Value | 0.001 |
Hit Clone Code (BAC ID) | MED24 |
Hit Gene Code | At5g03840 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | PEBP (phosphatidylethanolamine-binding protein) family protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |