SimpleSearch - Line and FST details


Line specific information

 
Line ID 405D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N438822)
Segregation Analysis 50:48:47
Confirmed for Hit At1g77630
Parent of DUPLO pair 2422
Parent of pair(s) none

Gene hit At1g77630

 
Sequence (A. th genome BLAST matches underlined) 
>12-K017820-022-405-D02-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTTCCTTGTCTATGTCCGGTAGATGAATCT
CTCGCCAACACTCTATAGAGATACCTCCCGCCTGGACGATTAGCTGGATTACCCGGGATT
GAATTGCTTGAAGAAACCGTAGCTCCTCCAGGTGAAGCCGCGGGGACTGCGGCTATAGAT
GATCCTCCACCAGCAATATCATCAAACTCTGGTGATGGCGAAGGTGAAGGTGAAGGTAGA
TACATCAGTTCCTTTGGAACATTATCAGGCGGGGCTATAAGCGGTGCTAATTGTTGCGGT
CCTGCAAATTGTTTTTACCAATTGCATTTCAGCTGGAGATCAAGATTTCACTCATTGTGT
TTTATCATAACGCATGAGACAGTATACTTACCAGGGCATCGAGGTTGAAGAGACATGGAC
AACCTGAAAAACAAACAAAGAGAGACGGAGGGAGATTGGTTATATAGGTTGTTAAATTCA
TTAGCAGGGGAAATGTGATAAGGAAAGACTCATTACGTGGTCAAGATAGTGCCACTATGG
GATCTCCCCCATAAAGGGAGAANATGNAATCCTCCCCTATAATGANCCCTATGTGATCCT
TCCCTATTAGTAAGNNCCCCCCACCCNNATAAAAAAATACAAACCCCTTTTTTCTAAAAA
CACCAAAATTCCCCCCCCCCTATTTAAAAACCGAAAACAACTCNACCCATTATTCTTTTT
TCCAAAATTTTATATTTTTAAA
GenBank Accession BX287849 [GenBank]
Graphic View Graphic view of gene At1g77630
Predicted Position of Insertion Chr1:29175328 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peptidoglycan-binding LysM domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37