SimpleSearch - Line and FST details


Line specific information

 
Line ID 405E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N438834)
Segregation Analysis 50:46:34
Confirmed for Hit At1g78890
Parent of DUPLO pair 2305
Parent of pair(s) none

Gene hit At1g78890

 
Sequence (A. th genome BLAST matches underlined) 
>13-K017866-022-405-E02-8409
TTATACGTGTAAAGCCTCAATCACGATGACCACGGAGACTGACTATCAAATACTATCTAT
CCCTCCGAGGACGAGGAATAAACCCCAAAACTCGTCAGGGTAAGCTATAACATGGTCGCA
ACAGTCGTATATAACTTTCTATTGATTTCACGAGCTGAAAGCAGGGAAATTTGAAGAGCA
AATGAACTTAACAAAAAACTCTGCTATGGGATCCTCCTCAATAGTGAGACCATAATTACG
GCGTGCTTACCATCTCGTGTAAATGCGGGAATTAGATGAGAACCCTACCGATCTAAGACT
TGATTTCCCCTTTTCCAAAAAACGAACAAATACAAACCCCCCTCATTGGTAGGCCAAAAG
CAATAACCCAATTATTCTAATTCGGAAATCTTTTATTTCAACGGGTTAACATTCCGGACA
ATTGGGGGGCTTAGATGAAAAACTTCCCATCCGATGCCT
GenBank Accession BX287862 [GenBank]
Graphic View Graphic view of gene At1g78890
Predicted Position of Insertion Chr1:29657230 - go to primer design
BLAST e Value 3e-72
Hit Clone Code (BAC ID) F9K20
Hit Gene Code At1g78890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287862 [GenBank]


Last Updated on 10.06.2021 13:37