SimpleSearch - Line and FST details


Line specific information

 
Line ID 406F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N438946)
Segregation Analysis 50:50:41
Confirmed for Hit At2g40250
Parent of DUPLO pair none
Parent of pair(s) 8296, 79248, 79258, 79270

Gene hit At2g40250

 
Sequence (A. th genome BLAST matches underlined) 
>46-K017952-022-406-F06-8409
CATGAGCATTTACATTGAGTAAAATCTAATCATTATATAAGCAAATGCGTACAGGTCTTA
CTCTATGGGATCCTCCCTATAGTAGAGAGGAACGAACACCCCACTGCGGATTGTGGTCAC
TTGATTATACGGGAAGACTTCGGCATAATGATTGCTTATGCGATCTTCTGTCTATATGGG
ATCCTCCCATCCGTGAGAATACTTGGCCTGACAGTTACCAATGCTTAATCAGTGAGGCAC
CTATCTCTTCGAGCTGTCTATTTCCCTCATCCATAGGGTGCCTGAATCCACAACTTGTAG
ATAACTGCCATACAGCAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGAC
CCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGC
AGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCT
ATGGGATCCTCCCTATAGTGAGANGGNTNCGGCCAACAGGACCCCGCCCCTCCTGTTATC
GGCCGGCGCCCAAATCCCCCTTTAACAATTTAATACACCGGGCTCTTTACCATCGAAAGG
CGCGCCCAGAAGAACGGCCGCCGATGAATGACGGATTTCCCCCTTCCAAGGGGGTGATAA
CGCGACGGGCCTCGCGTCTCGAACGGCGTAGCGGGATGGAAACCAAGACCGACCGTCACG
GGGAAGATCCCGGCACAACAATATAACCGCCTCCTAC
GenBank Accession FR809704 [GenBank]
Graphic View Graphic view of gene At2g40250
Predicted Position of Insertion Chr2:16814158 - go to primer design
BLAST e Value 2e-18
Hit Clone Code (BAC ID) T7M7
Hit Gene Code At2g40250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SGNH hydrolase-type esterase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37