SimpleSearch - Line and FST details


Line specific information

 
Line ID 407B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N438991)
Segregation Analysis 50:43:40
Confirmed for Hit At1g71490
Parent of DUPLO pair 2592
Parent of pair(s) none

Gene hit At1g71490

 
Sequence (A. th genome BLAST matches underlined) 
>18-K017953-022-407-B03-8409
CATGTTGCAGGTTTGCAATCTGAGCACAAAGAGGGAGAATGCTTGCTATGGGATCCTTCT
TATAGTGAGAGNNNNNNANCNNNNNGNTCTCTCCTTTTTTTTTAATTCAAACTGGCAACA
TGCCCTCTTGGATTTATAAAAAATAAAGAAAATATTTCTTTTA
GenBank Accession BX287990 [GenBank]
Graphic View Graphic view of gene At1g71490
Predicted Position of Insertion Chr1:26934174 - go to primer design
BLAST e Value 5e-16
Hit Clone Code (BAC ID) F26A9
Hit Gene Code At1g71490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F3F19

 
Sequence (A. th genome BLAST matches underlined) 
>18-K017978-022-407-B03-8409
ACCCTATGGGATCCTCCTTATAGTGAGAGACAGTATATTCCTCATGCTCCTACGGAATGG
AGCTACCAATTCAGTGGAGCCCACCATGAA
GenBank Accession FR809708 [GenBank]
Graphic View Graphic view of sequence FR809708 of line 407B03
Predicted Position of Insertion Chr1:4519173 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) F3F19
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37