SimpleSearch - Line and FST details


Line specific information

 
Line ID 407C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N439006)
Segregation Analysis 50:47:47
Confirmed for Hit At3g56030
Parent of DUPLO pair 12841
Parent of pair(s) none

Gene hit At3g56030

 
Sequence (A. th genome BLAST matches underlined) 
>43-K017953-022-407-C06-8409
ATTTCCCGGACTGAAGCCATTGTGTTAGGCGCGTGTAAGTCAGGGAGAGTTGAAGCGGCG
ATGGCGATTCTGAGGAGGATGGAGGAAGAAGGGTTATCGGTATTGTACGCCACGCATGCG
CACGTTATAGGAGAAATGGTGGAGAGTGGCTATTATGCGCTAAGTGTGGAGTTTGTGATG
GCGTACGCGGGGAAAGATAAGAGATTAGATGAAGAGAATTTGGGAAGTTTGGCTATGGGA
TCCTCCCCTATAGTGAGANNNNNNNGNNNNNNGNNTTNNCNNNTTTTTTTTTATTTCAAA
AAGGTATATGTCCTCTGCGTAATTATAAATGGAAGGTCCTTTTTGTAAAAAGGACAACTT
CCGATCCGCCGTATTTATAGGCGAAGGCAGTAAGCATATTATTCTATTTCGGAAATCTTT
ATTTCGACGTGCCTACTTTCACATCCAAATGGGGGCTTAAAAGAAAAACTTCAGGATCGA
TGCCATGATT
GenBank Accession BX288000 [GenBank]
Graphic View Graphic view of gene At3g56030
Predicted Position of Insertion Chr3:20791974 - go to primer design
BLAST e Value 9e-119
Hit Clone Code (BAC ID) F27K19
Hit Gene Code At3g56030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37