SimpleSearch - Line and FST details


Line specific information

 
Line ID 407E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N439028)
Segregation Analysis 50:45:45
Confirmed for Hit At2g01610
Parent of DUPLO pair none
Parent of pair(s) 8260, 8285, 8299

Gene hit At2g01610

 
Sequence (A. th genome BLAST matches underlined) 
>29-K017953-022-407-E04-8409
TGATACTGAGATTACGGCGGAAGCTGTTTGGTGGCCATCACCGGAGTATTTAGCGGCAGA
GCGTGAGAGTTTGGAGAGAAAAGCCGCAGTGGATTTGGCTTGTGAAAGTGAAACGCCGAT
TGCGAGCTTGGCTATGGGATCCTCCCTATAGTGAGAAAAATCTGATTTTTCCGGTGCACA
ATTCTTTATT
GenBank Accession BX288023 [GenBank]
Graphic View Graphic view of gene At2g01610
Predicted Position of Insertion Chr2:274332 - go to primer design
BLAST e Value 2e-64
Hit Clone Code (BAC ID) F2I9
Hit Gene Code At2g01610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g09620

 
Sequence (A. th genome BLAST matches underlined) 
>29-K017978-022-407-E04-8409
TGATCTGTAATTTCCCGGACATGAAGCCTTTACATTGAATATATGCCTGTTAAGACACCT
TACTATGGCCAGCACTTGTCATATCGTTATATTACCAGAGATGGTGTATCTTGATTAAGG
ATTACATTCGGATGTGCTGACATAGTATCTGCCTATGGGATCCTCATCATAATAGGAGAG
CAAGGCTATTTATCCGTTTCTGACAAGGCGAAATGGCGTCACCGCGAGCGTCACGCGCAT
TCCGATCTTGCTGAAAAGCGTTGCTTGGAACACTTTTGACTATGGGATCCTCCCGATAAT
GAGACTCAATGATTTGAGTTCATCGGCGAACGAGTTAAGAGTATCCTCGCACACCCTATG
GGATCCTCGCTATAGTGAGAGGACATACTGAACGATCGACGCCTAGAATCCGCCATACAA
AAGGGGGAAAGCAATACATTTCTATTCAAGTACGGAGATCTTTATTTAGACGTGTCTACA
TTTCCGTCCTAATGGGGGGTTATATGAGAAACTCCTCGATCGATGCCATGA
GenBank Accession BX288024 [GenBank]
Graphic View Graphic view of gene At4g09620
Predicted Position of Insertion Chr4:6079223 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) T25P22
Hit Gene Code At4g09620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mitochondrial transcription termination factor family protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37