SimpleSearch - Line and FST details


Line specific information

 
Line ID 407G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N439050)
Segregation Analysis 50:50:36
Confirmed for Hit At1g62590
Parent of DUPLO pair none
Parent of pair(s) 43522, 84906, 84909, 84910, 84911, 84912, 84913, 84914, 84917, 84918, 84921, 84922, 84923, 84924, 84925, 84927

Gene hit At1g62590

 
Sequence (A. th genome BLAST matches underlined) 
>15-K017953-022-407-G02-8409
TGATCTGAGATTTCCNGGACATGAGCCATTTACAATTGATATGATAAATGCCCAAAACGT
TTTCAAACAGATGGTTTCTGATGGTGTACCTCCTGATATAATGACATACAGCATTTTGTT
AGATGGACTCTGTAATAACGGGAAGCTATGGGATCCTCCCTATAGTGAGATTGCTAACCA
TGAACTCCAACGTCTGCTTGTCCTTGTCTATGGGATCCTCCCCACAGTGAGAATAAAAAG
AGAAAGGAATTTTTTGTTAGACCAGCAACTCAACAACCCTTCATTATCGGAGGGCGAACA
ACAAGAAACAATTACTTTTATTTCGAAATTCTTTTTTTCAAGGGGCCTATTTCTACCGCC
AAGGTGGGGGATAAAGAAAAAAAACTTCGAAAACCTTTGCTTTAGACCCCCCNANNTTAG
ANNNNNNAAATGGGGGCTTAAAATGAGAAACTTCACGATCNATGGCCTTGATTTCCCCCA
TTCCCANN
GenBank Accession BX288038 [GenBank]
Graphic View Graphic view of gene At1g62590
Predicted Position of Insertion Chr1:23177842 - go to primer design
BLAST e Value 3e-48
Hit Clone Code (BAC ID) T3P18
Hit Gene Code At1g62590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pentatricopeptide (PPR) repeat-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37