SimpleSearch - Line and FST details


Line specific information

 
Line ID 408D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N439111)
Segregation Analysis 50:46:30
Confirmed for Hit At5g16500
Parent of DUPLO pair 12470
Parent of pair(s) none

Gene hit At5g16500

 
Sequence (A. th genome BLAST matches underlined) 
>20-K017955-022-409-D03-8409
GGACTGAAGCATTTACTGTAGAAAAAAAAATATGTTAGCTTTCTTATCACGGAACTGGGA
ATTAGAAAACCTATTTTCTAAAAATGTTGTTTGGGGGGTTTGTTTGGTTTCAGAAGGTGC
GACGACTAAACGGACTGAATAAAGAGATCCTGCAGAGCAACTTCCGCCGGAGAAGGCATT
CACTTTCCGGGAGTTAGCGACGGCGACCGGAAATTTCCGGCAAGAATGTCTTTTATGAGA
AGGTGTATTCGGCAGGGCTTACGAAAGAACTCTACACTCTACTGGCCAGGTTTGTTACCA
TACGAAAGTTCAAACCTCTGTCTACAATTGTCGGAGATTGGCTTTGAATTTGTTTCCTAT
TGCTGGGGGAGGGTCGGGGGAAGCTAAAAGGCACCTCTGGGATCCTCCCGGCTNGTGAGG
AAAAACAATAACCAGGAGTTACCCATTTTTTTCCATACTATCCGGCAAAAAGCCCCCTCC
GGTATAAGAAGGAGGAAAGTACGTTTTGAAAAAAAAATCAATTATCAACCCGGCGGGTTT
TGGTGCCCAAACCAAAAAACAAACCACCCCAAATCCGAAAACCCGGATTTTCATTGGGCC
CACCTTTCCGCCCCAATGGGGGGCGGAGAAGGAGAAATTTTCAAAAAC
GenBank Accession BX288128 [GenBank]
Graphic View Graphic view of gene At5g16500
Predicted Position of Insertion Chr5:5388857 - go to primer design
BLAST e Value 2e-110
Hit Clone Code (BAC ID) MQK4
Hit Gene Code At5g16500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37