SimpleSearch - Line and FST details


Line specific information

 
Line ID 409E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N439218)
Segregation Analysis 50:48:40
Confirmed for Hit At4g24140
Parent of DUPLO pair none
Parent of pair(s) 3325, 3360
Note

Gene hit At1g62050

 
Sequence (A. th genome BLAST matches underlined) 
>13-K025965-022-408-E02-8409
GAAGAAACAACTACAGGAGAATTGTTGTTCTATGCGGCTTTGGGACTAAGTTATCATGAA
GATGAGGCTAGATTCTCTACCCATTGAATATGCTGCGCCTGGGTATGGGATCCTCCCTAT
AGTGAGTGGTTCTCTTAGTAGACTTTGATTTCTTCATTTTACTACTATTACCTGACTTAC
TATTACTACTACTCATGCTTGTCCATTTATACCCAATTGGTATAGCGAATGGGTCCGGCG
TTTGTTGCTCCTCCTCTTCTACCCGTCGATGTGAGCCTTTTCCGGTGGGTATGGGATCCT
CCCTATAGTGAGA
GenBank Accession CR396958 [GenBank]
Graphic View Graphic view of gene At1g62050
Predicted Position of Insertion Chr1:22936215 - go to primer design
BLAST e Value 2e-85
Hit Clone Code (BAC ID) F8K4
Hit Gene Code At1g62050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ankyrin repeat family protein
Insertion Classification TS2TE (3')
Confirmation Status failed
Other FSTs Supporting this Hit CR396959 [GenBank]

Gene hit At4g24140

 
Sequence (A. th genome BLAST matches underlined) 
>11-K112550-0022-409-E02C-8409
TTGAATTATCCTGGATAGAGAAATATATTTATTATTAGCTAGTAAACTAGATGATATGAC
AAAATGTAGTTTCGTACTAGATGATATGACAATAAAGAGTCATAGAGTTTGCATCTCAAC
GTAGCTAATTTACTTATTCCTGATGATGATTATTTAAACTTGATTGAATTTAATTTTTCA
AATATTAATTACGAAATTAATAGCTACTATTGATTTTGGAGTTGAACTCATATCTGGTAG
CACTAATCGGAGGAATTTTTATTCCATTTTCTATATTTTATTTAATCTCGAAGGGTTGGT
TGTTTTGGTAGGACGAGAGCACTATTTCTAAACCATGTATTTTACTTGTAATACCTATAA
AGTAGAAACTATAGAATAGAATCGTAAAATCTATACGGACATGTCACTGAAATAGGCCGA
TCAACCAACGTAGACAATTCAAAAGTAAGATCAATTAAATTGCTCCAATTACACATAGTC
ATAAGTACTTAGGTTGGAATTTCAAAATTTAGCATAACACTAGAGTCAGGTTTGTTTGGT
TGCCTAAGTCCCCATTGTCCCCTAGAGA
GenBank Accession HE664631 [GenBank]
Graphic View Graphic view of gene At4g24140
Predicted Position of Insertion Chr4:12530355 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T19F6
Hit Gene Code At4g24140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37