SimpleSearch - Line and FST details


Line specific information

 
Line ID 411G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N439437)
Segregation Analysis 100:77:55
Confirmed for Hit At1g74380
Parent of DUPLO pair none
Parent of pair(s) 3409, 3495, 7081, 93473

Gene hit At1g74380

 
Sequence (A. th genome BLAST matches underlined) 
>39-K018000-022-411-G05-8409
TGATCTGTAACTTCCNGGACATGAGCATTTACAATTGATATATCCTGGACATGGGGCCAT
TTTCAATGATGTTCTGGTTAACTGCATCGGCGCTTGAGCTTCCTATGGGATCCTCCCTAT
AGTGAGAAAATAGACATTCATTTTATCCTATCTCTGCTGACATCTACATTGTTTGAATTG
AAAAAAAATTGGAAATAACGACAATCCTTTTCTGAAAAAAGACCAAAATACTACCCGCTG
ATCCATGTGGAGAAACCCGGACACGAATTCTTTTACTATTGAATATATTCTGGACACGAG
GCCACTTTCACTGCCGTTTGGGGGAACTAGAGAGAAACTTCAGGATCCTACCGTAACCTC
CCCANAGNGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCGGNNNGNGGGGNNNNGGGGGGGGGNGGAGGGG
GGGGGGGGGGCCGCCCCGGNNGNGGCGGCGGGGCCGGCACCCGGGGGGGACAGACAGGCA
CCCACGAAACGAGGGCCACCGCGACGCCCCAGTGGAATGGAACGACACAGGAAACACGGC
AGGGAGGAAACCCCACGGACCGAAGACCCCACCAAACAAGGCAGAAGACAAGAACGA
GenBank Accession BX288294 [GenBank]
Graphic View Graphic view of gene At1g74380
Predicted Position of Insertion Chr1:27960111 - go to primer design
BLAST e Value 2e-15
Hit Clone Code (BAC ID) F1M20
Hit Gene Code At1g74380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation xyloglucan xylosyltransferase 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809803 [GenBank]


Last Updated on 10.06.2021 13:37