SimpleSearch - Line and FST details


Line specific information

 
Line ID 412D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N439500)
Segregation Analysis 100:100:66
Confirmed for Hit At4g34440
Parent of DUPLO pair none
Parent of pair(s) 1221, 4023, 4105, 4237

Gene hit At4g34440

 
Sequence (A. th genome BLAST matches underlined) 
>60-K017997-022-412-D08-8409
ATTTCCCGGACGGATATTTTCATTGTAGATGTAGGACATTACCCTTTGTTGAATATTTGG
GGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAGTTGCCCTTTGGT
CTTCTGAGACTGTATCTTTGATATTTTTAGGATAGACAAGCGTGGCGTGCTCCACCATGT
TGACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAG
TCTTTACGGCGAGTTCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGG
ATCCTCTATGGGATCCTTCCCTTATAGAGACGGAGCGGCTGCATATTCTCCGGTGACTTT
TCGCTCTGGGATCCTCGCTATCCTGAGATGACCGAAACAGAAACAATGGCTGAAACTACA
ACGGAGACTGCTCCTCACCCTCATCACCGGCGTCAAGGAACAGACCTTCCGGTGACTGTG
GCTCACCTTCACCTCCTCGGTCGATATGCCCTCCTCAGAGTAGGGGATATTCGGAATCAT
CATCGGGCTAATCCTCCACAAGCCAACATTGGATTGATTATTGGGACCCCTTGTAAGAGC
AGGGCTTTTGCTTCTACTTGCAGGGTGGATTTGCCTCTGTTGCGGCGGGAAGAAGGAAGA
AGAAATCTCCTCAGGTCAACCA
GenBank Accession BX288338 [GenBank]
Graphic View Graphic view of gene At4g34440
Predicted Position of Insertion Chr4:16466049 - go to primer design
BLAST e Value 6e-83
Hit Clone Code (BAC ID) F10M10
Hit Gene Code At4g34440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T14A16

 
Sequence (A. th genome BLAST matches underlined) 
>60-K018001-022-412-D08-8409
CTGATAGTTTAAACCATAGGCGGGATACGACAATCGGATCCCCGGGTACCCTGTCCTCTC
CAAATGAAATGGACTCTCCTTATATACAGAGAAGGGTCTCTGCGAAAGATAGTGGAGATT
GAGCGTCATCCCTTATCTCACAGGAGATATCACATCAATCCACTTGCTTTGAAGACGTAT
GGAAATATGTCTTGAGTGTTTAGGCGGCTCAATGCCTACTATCAGAATATTTCATGCATA
TTCTCCATAACCCTAATCGCCTATGGGATCCTCCCCTATAGTGAGACTGTTTAAGTATCC
GGTTTCCTTAAGGCCTATGGGATCCTCCCTATAGTGAGACGC
GenBank Accession BX288339 [GenBank]
Graphic View Graphic view of sequence BX288339 of line 412D08
Predicted Position of Insertion Chr4:4399591 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) T14A16
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37