SimpleSearch - Line and FST details


Line specific information

 
Line ID 413B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N439570)
Segregation Analysis 50:49:29
Confirmed for Hit At3g26490
Parent of DUPLO pair 11769
Parent of pair(s) none

Gene hit At3g26490

 
Sequence (A. th genome BLAST matches underlined) 
>42-K025921-022-413-B06-8409
CGGACAGAAGCCATTTTACAATTGAATATGTCCTGCACCTTACTTATCCTACAATTGGGA
TCCTTTCGTCCAGCGTGGACAGAAGCAGTTTTGTAATTTCCATATACATGAGAGACTATC
AGCTATCATCTACATTGCAGTATGGGATCCTACCTATAATGAGACAAATAGTCAAGAAAA
GTTCAAGTCTCTAAACAAGATTCTCCGTCTCTCCCAGCTCCACTTCTTCCGTCATCCCTA
GATACTCTGCTGCGCAACGTATGGGATCCTCCCTATAGTGAGNCCTANTNNNCNNNNNNA
NNNNNNNNNNNNNTTNANNAAATNNNTNANNNNNNNNNNNNNNNANNANNNANNNAAANA
AAAAAAAATAAAAAAAAAAAAAAANAANAANAAAAAANNAAAAANNAAAAAAAAATAATT
TAATATTTATATTAAAG
GenBank Accession CR397019 [GenBank]
Graphic View Graphic view of gene At3g26490
Predicted Position of Insertion Chr3:9704859 - go to primer design
BLAST e Value 2e-41
Hit Clone Code (BAC ID) F20C19
Hit Gene Code At3g26490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phototropic-responsive NPH3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g21370

 
Sequence (A. th genome BLAST matches underlined) 
>42-K025920-022-413-B06-8409
GCGAAATTTCATATTACTTACCTTGAGCAAATCGTTAATTGTCCTTTAAAACTTCCATCT
TTGTTCAACAAAAATAATCTCAGACTCTCGGTCAACGGAATCGAAGCAAAACTCTGCCTG
TATGGGATCCTCCCTATAGTGAGAC
GenBank Accession CR397018 [GenBank]
Graphic View Graphic view of gene At1g21370
Predicted Position of Insertion Chr1:7483753 - go to primer design
BLAST e Value 2e-48
Hit Clone Code (BAC ID) F24J8
Hit Gene Code At1g21370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37