SimpleSearch - Line and FST details


Line specific information

 
Line ID 413F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N439620)
Segregation Analysis 50:44:44
Confirmed for Hit At4g08310
Parent of DUPLO pair 351
Parent of pair(s) none

Gene hit MTG10

 
Sequence (A. th genome BLAST matches underlined) 
>62-K025921-022-413-F08-8409
ACAGAAGCCATTTACATTGAATATATCCCGCACGATTGATCCTCCCCACTGTGAGAGGAG
TTCCGCAAATCCCCTTTATGAACCCCTTCACATTCAAAGTCTTCCGATTACACGATTCTC
TCGTTCATTATGCAGTGGTCTCATCTTGGAGATTATTTGTTCTCTTTTCGTCAACGTGTT
ATTGATCGATTCGATTATTCATATATTTAGGATTACACTTTTTTTTTGGAACCACCTGTC
ATTGTATCCGTTGCCCTGTCGTGCCTATACCAAACCAGTCATAACATTTGATGCATGTCT
ATGAGTTGAGACTTTATATAGTTGATTGAATTTGTTCAACTATCTATTTTTGTTTTGTAT
ATTAAATTTAAAAATTTATTATGAATCATTGATAAATGATAATGGGTGAAAAAACCAAGT
ACGCTACTATACGTTTCAACAAGTTTGAAGAAAGAAGTGGATTTCTCCTATAGCCGTCTA
GTTAGATTTCCACATACT
GenBank Accession CR397065 [GenBank]
Graphic View Graphic view of sequence CR397065 of line 413F08
Predicted Position of Insertion Chr5:24957350 - go to primer design
BLAST e Value 1e-132
Hit Clone Code (BAC ID) MTG10
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g08310

 
Sequence (A. th genome BLAST matches underlined) 
>62-K017998-022-413-F08-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTACATTGAATATATCCCGTACCATTCATC
CTCACTCCATAAAATGCCTCTAATACTTATATCATATATGAACTACAAATCACACAAATT
CCAAATAAATAAACGTACCTCATGTCCTTCTATTCATATCTCCTTAGAACGATGTGCGAT
CCTCGCTATAGAGAGTACTCCTTGAACTCGACACAATGTTGCTTGTATCAATACCCTCAA
GCTCCTTTGTTCTTTCTTTTCTTTTCTTGACTTCCTTGATCTCTGTCACCAGGTAAAACC
ATCAACAATTTTATCATCCGCATATTTTTCGCTCTATGGGATCCTCCCTATAGTGAGACC
AAGGGAATCCCCCCTA
GenBank Accession BX288405 [GenBank]
Graphic View Graphic view of gene At4g08310
Predicted Position of Insertion Chr4:5249227 - go to primer design
BLAST e Value 9e-73
Hit Clone Code (BAC ID) T12G13
Hit Gene Code At4g08310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA ligase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX288405 [GenBank]


Last Updated on 10.06.2021 13:37