SimpleSearch - Line and FST details


Line specific information

 
Line ID 414C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N439674)
Segregation Analysis 50:44:41
Confirmed for Hit At1g07810
Parent of DUPLO pair none
Parent of pair(s) 68147, 96953, 96954

Gene hit At1g07810

 
Sequence (A. th genome BLAST matches underlined) 
>11-K026070-022-414-C02-8409
GATCATCTTTTCTTCCTCTTTTTTAATGAGGGGATCCTCCCTTTAGTGAGACAATTGTGC
GTATGGAGATGCCTACAGAGAGCCGATATAGAAGCATTAACTGCATCGATGAAACCTTGT
CCCTAAATCCTGTTGCATCCCGACACGAATAAAAGTTCTCGCAGCATCCTAACGGAAAAC
CCCAAACTGAAGACAATCTGAGCAATCTGACAATCCGTCAGCAATCTCTTCCACTTGTTC
CTCAATCCAACGGCGCAGAGGAAGTAGTAACCGTATGGCATCCTCCCTATAGTGAGACTA
TATCTGTTACTTATGTTTATGCATTTTTACAGATGCCTAACCTCCTGCACTTTTCCTTTT
TTAACATTATTGAAGGTTGTTGTCGGCTATGGAGTGAACTAGAACAACGGATTGCCACCC
TTGAGTTTGACCGTGACCGGAAATCAATGGGAGTTATGGTGGATTCCAGCTCAGGAAACA
AACTGCTACTGGTCAAGGTC
GenBank Accession CR397117 [GenBank]
Graphic View Graphic view of gene At1g07810
Predicted Position of Insertion Chr1:2418012 - go to primer design
BLAST e Value 2e-109
Hit Clone Code (BAC ID) F24B9
Hit Gene Code At1g07810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ER-type Ca2 -ATPase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX288426 [GenBank]

Gene hit At3g06470

 
Sequence (A. th genome BLAST matches underlined) 
>11-K026073-022-414-C02-8409
GACATGAAGCCCTCTACAATGAATATATCCTGATTGCCTTGGCGACTGGAAGGCGAAGGA
GAACGCCGGCAACCCCATCCACCCTCTCGGGAGTGTGATGATCCCGAGACTGAGTGGTAT
TGATCCTTTAGCTGCTGCGTTTAAACACCGTCCCCGAATGCCGGTGCGGACGGACCCCAT
GAAATGCTCTCGCATCATCCGACCGGATGGCCTGAGACTGAAGACAATCTGTCCAATCTG
ACAATCCGTCCCCCATCTCTTCCCCTTGGGCCTCCATCCAGCGGCGCAGAGCGAGTAGTA
ACTGTCTGGGATCCTCCCTATAGTGAG
GenBank Accession CR397118 [GenBank]
Graphic View Graphic view of gene At3g06470
Predicted Position of Insertion Chr3:1985042 - go to primer design
BLAST e Value 2e-17
Hit Clone Code (BAC ID) F24P17
Hit Gene Code At3g06470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GNS1/SUR4 membrane protein family
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37