SimpleSearch - Line and FST details


Line specific information

 
Line ID 414D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N439695)
Segregation Analysis 50:44:43
Confirmed for Hit At2g28990
Parent of DUPLO pair none
Parent of pair(s) 825, 6702, 6705, 6711, 6732, 6742, 6751, 10727, 72906, 72943, 72976, 73065, 73094, 73123, 73149, 73176, 73201, 73247, 73248, 73250, 73251, 73253, 73254, 73255, 73256, 73257, 73258, 73259, 73260, 73262, 73263, 73264, 73265, 73266, 73267, 73268

Gene hit At3g55190

 
Sequence (A. th genome BLAST matches underlined) 
>84-K018037-022-414-D11-8409
GTTAATCCGTTAAACGATCATCGTAAGGAGATTCGTCGCTATGGGATCGTCCCTATAGTG
AGATAGTGATTGTCTCTTCTAAAGCACTACTGATTTAACTAAATACAATTTGAATTATTT
TTGAAAAATATCAATTAATAAAAAAGAATGATTTACAAGTGAGGAAAAAATACATCAAAA
TTGTAGCTCAATAGTTTCTATGGGATCCTCCCTATCGAGAGAGAAAACCAGAATGACTAT
TACCAATTCCTTTTGGGGGCTAAAATGTAAAACTTCCCAACCTTTTCATATAATGAACGT
ACTTATTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAA
ATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGGCT
TAAATGAGAAACTTCACGATCGATGCCTTGATTTCGCCATTCC
GenBank Accession FR809857 [GenBank]
Graphic View Graphic view of gene At3g55190
Predicted Position of Insertion Chr3:20460019 - go to primer design
BLAST e Value 1e-65
Hit Clone Code (BAC ID) T26I12
Hit Gene Code At3g55190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g28990

 
Sequence (A. th genome BLAST matches underlined) 
>84-K026073-022-414-D11-8409
AAGATATTATCAGAAACCTTAGTGTAAGGGTATTTCGACTCTTAGATACTTCCCAAAAAG
AAAACGTAATTGTTATAGTCTTGATGTCAACCGTGGCACAACTTATCGCATCTCGGTTAA
CTTTGTATATGGAAATTATGATGGTCCTAACCGTGATCCAAACTTCTATATCCATCTTGC
TCCCAATAAGTGCAAAAGAATAGATTTGGATGGAGAGATTGAAGGTATGTGATCCTCCCT
ATATTGAGTGAGAAAAATCAAGCCCCTTGATTGAATCCCCCCCTTTAAAAAACACCACTC
CACTCTCATAGTCAACCTTCAAGCGAGCTATGGCGGAAATACTTAGGGTTTATTCCCCAT
AGGCGGCCAAATCCAAAGTTGAAATATGCTCTAGAATTTCCCCTAAACTCGAACGCCCTG
CAAAAAAGGTAATTATAAGGCTAAACTCTAA
GenBank Accession CR397146 [GenBank]
Graphic View Graphic view of gene At2g28990
Predicted Position of Insertion Chr2:12455325 - go to primer design
BLAST e Value 5e-73
Hit Clone Code (BAC ID) T9I4
Hit Gene Code At2g28990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX288440 [GenBank] BX288440 [GenBank]


Last Updated on 10.06.2021 13:37