SimpleSearch - Line and FST details


Line specific information

 
Line ID 414E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N439703)
Segregation Analysis 50:50:38
Confirmed for Hit At5g57440
Parent of DUPLO pair 1627
Parent of pair(s) none

Gene hit At5g57440

 
Sequence (A. th genome BLAST matches underlined) 
>53-K026070-022-414-E07-8409
TCTCACGATCATGCAACACAAACCAGAGCGGCATGAGTGTATGCAGCAAGAGCAGATAAG
CCAATGAAGTTGTGAGATTTTGAATACACAGAACAAAAACTCAATCGCTCGATTTCCGAT
CAGATTCAAGCTAATTGCTTTAGCATCTTAACATCAATTGTATGAAATCAATCCTGGAAA
CTAAACAGTCACTACTAAAAAAACCATCAAATCTAAACAACGATAGTGACAGTAGTATGG
GATCCTCCCTATAGTGAGACNTATTNNTCNNNNNNN
GenBank Accession CR397155 [GenBank]
Graphic View Graphic view of gene At5g57440
Predicted Position of Insertion Chr5:23272542 - go to primer design
BLAST e Value 2e-100
Hit Clone Code (BAC ID) MSF19
Hit Gene Code At5g57440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR397155 [GenBank]


Last Updated on 10.06.2021 13:37