SimpleSearch - Line and FST details


Line specific information

 
Line ID 415G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N439818)
Segregation Analysis 50:32:19
Confirmed for Hit At5g61730
Parent of DUPLO pair none
Parent of pair(s) 61761, 93892
Note

Gene hit At5g61730

 
Sequence (A. th genome BLAST matches underlined) 
>15-K018038-022-415-G02-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAGCAACTTTTGAAGGTAACCAT
CTATAAAAAGCTTTATTAATTATCTCTTAGATCTTTCATTTGATGAATGATTTTTCCATA
ATTAACGGGAATAGGGGTTTTTCGCGGAGCTACAAGATAGAGAATCTGAATTTGGTATCG
CAGACATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGTTTTTGAACATCGCTATGGGAT
CCTCCCCCTATAGTGAGA
GenBank Accession BX288490 [GenBank]
Graphic View Graphic view of gene At5g61730
Predicted Position of Insertion Chr5:24804218 - go to primer design
BLAST e Value 2e-107
Hit Clone Code (BAC ID) K11J9
Hit Gene Code At5g61730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC2 homolog 11
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g30750

 
Sequence (A. th genome BLAST matches underlined) 
>15-K026165-022-415-G02-8409
AATTTGGGTCATAGTTAACGCGAGCAGAGACCATTGACAAGTTGAATCTACCTGCATGNG
GAGGACGGACGTGCATGGGCATCCGTCCCTAGTAGTGAGCCCATATTCCTCGCCTACGCT
TCTTGCGTGTAATTTAATAGCACATTTGATTTGGTACCATCAGTTACCGATGACGTGACC
ACAGGGCATCACTAGATGCGACTGAGGCAAATCATGTAGTTTTTATGCGGATTCCCAATC
GGGGACTTAGATCCCGGCTTTATCATGCATATACAGGATCAACGTTATTCAATGCTATGT
GATCCTCTCCTCATTGAGCTAATGATTACAATTATGTCATCCAACCTTAGTTAATTAAAT
TTCCCAAACAGATATACTCCACTCCTAATTTTCTAAATATACCCACATTAACTACTGGTA
CATTATCATCCTAAAGATACCAAACTTTATTTTTCATATTACTATTAGTGCAACCGACAT
AATATGTATTTTATTTAATCTATGATGATTACGATTTGTTTAAACAATCAATAAAAAAAA
TTATCTATCTACTCTACACTTCTATGACTTTTTAATTATTAATTTCCAA
GenBank Accession CR397274 [GenBank]
Graphic View Graphic view of gene At2g30750
Predicted Position of Insertion Chr2:13100730 - go to primer design
BLAST e Value 1e-06
Hit Clone Code (BAC ID) T11J7
Hit Gene Code At2g30750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450 family 71 polypeptide
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 127H03


Last Updated on 10.06.2021 13:37