SimpleSearch - Line and FST details


Line specific information

 
Line ID 416C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N439870)
Segregation Analysis 50:48:48
Confirmed for Hit At5g57410
Parent of DUPLO pair 11982
Parent of pair(s) none

Gene hit At5g57410

 
Sequence (A. th genome BLAST matches underlined) 
>43-K018045-022-416-C06-8409
AGCATTTCAATAGAATAATCCATTGGAGCAGGTAATCTGTAACTTCGATGGCAGCTGAGG
TATACTTATAGATTCCTCTTCCTTAATTACTCCTGTACGTTTTTTCTTTGTAAAAAGATT
ACAATGTCTCTTGCTTGATCTGTATTTATATAATGTATCTCTACAGGGAGTATGAAAATG
CCTATGGGATCCTCGCTATAGTGAGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCA
ATTCAAAAATGTAAATGTCCGCACCGTTATTATAAAATGAAAGTACATTTTGATAAAACG
ACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGA
AATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGGCTTAGATGAAAAACTTCA
CGATCGATGCCTTGATTTCCCCATTCCACCAAAG
GenBank Accession BX288512 [GenBank]
Graphic View Graphic view of gene At5g57410
Predicted Position of Insertion Chr5:23265250 - go to primer design
BLAST e Value 2e-67
Hit Clone Code (BAC ID) MSF19
Hit Gene Code At5g57410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Afadin/alpha-actinin-binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX288512 [GenBank]


Last Updated on 10.06.2021 13:37