SimpleSearch - Line and FST details


Line specific information

 
Line ID 419A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N440139)
Segregation Analysis 50:50:39
Confirmed for Hit At2g38150
Parent of DUPLO pair none
Parent of pair(s) 1049

Gene hit At2g38150

 
Sequence (A. th genome BLAST matches underlined) 
>81-K018100-022-419-A11-8409
GATCTGTAATTTCCCGGACATGAAGCCTTTACATTGAATCTATCGATCTTCGCGAACTTC
ACGTTTTCTGTATTATTATTGTATCTCCTCTATATAGAATCTCCAAAATCAACTCTCTAT
GACAATAACCTACCGTTCAAACCAAACGTGCCTCTTCCCAGACCCTATGGCCCCATGAGT
AGTAGTTGTAATATCAACTCAGTTGTGGACTCGGAGCATAAAGAGAAGGAGTTAGATCCG
TTGTTACCTCCTCGTAAAGCTATGGGAT
GenBank Accession BX288695 [GenBank]
Graphic View Graphic view of gene At2g38150
Predicted Position of Insertion Chr2:15982901 - go to primer design
BLAST e Value 3e-122
Hit Clone Code (BAC ID) F16M14
Hit Gene Code At2g38150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha 1,4-glycosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g22660

 
Sequence (A. th genome BLAST matches underlined) 
>81-K018139-022-419-A11-8409
TGATCTGANATTTACCGGACATGAAGCCATTTACACTTGATATTGAAGCCATCTACATGT
ATTTATTTTGAATTGAAATCTATATGGTCAGATATAATATGGTCATTATACCACAAGTGT
TATAATACTCCGTCGCCTATGGGATCATCCCTATAGTGAGANCACCCAATGGCTACACGA
CCACTATGTGTTCCACCCCCTCAGGTGAGGACTCCGAGCATAAAGAGAAGGAGTTAGATC
CGTTGTTACCTCCTCGTAAAACTATGGGATCCTCCCTATAGTGAGATGGGATCCTCCCTG
TATTGAGANNTTTTTTTTTTTTTCCNTAACGTAGAGGGGCCCGCCCCTCTAAATCACCCT
TT
GenBank Accession BX288696 [GenBank]
Graphic View Graphic view of gene At1g22660
Predicted Position of Insertion Chr1:8020351 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) T22J18
Hit Gene Code At1g22660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Polynucleotide adenylyltransferase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37