SimpleSearch - Line and FST details
Line specific information
Line ID | 420G03 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N440299) |
Segregation Analysis | 50:50:45 |
Confirmed for Hit | At4g02390 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g41762
Sequence (A. th genome BLAST matches underlined) | >23-K018101-022-420-G03-8409 TGATCTGTAGTTTCCCGGACATGAAGCCATTTTTGAATATATTGACCTAGGCTGTACCCG AGTGTGAGCGAGGTGTGAGTGTCGCCCATGGGCATCGACACCTTGCGGCTATTGTATCTT CCCTATCGTGAGAATTCCCCTCGAGAGCGTTAGCTCTTAC |
GenBank Accession | BX288857 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:14196472 - go to primer design |
BLAST e Value | 1e-24 |
Hit Clone Code (BAC ID) | F21A14 |
Hit Gene Code | At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | hypothetical protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Gene hit At4g02390
Sequence (A. th genome BLAST matches underlined) | >23-K018140-022-420-G03-8409 ATGAAGCACTTACTGATATATTGATCTATGGGATCCTGCTTATAGTGAGACAGATTATAA CGCGGATAATCTACCCCCGGGAAAGCTAAGGTATGAAGATAATCTCATTCATATTTCACA CAAGTTCCTTATCTCAAACCGCAATGAATTATGATTTACTATTTTTGTACTGTACCTTGA TTTGTTATTTGATGGTTGCAGCACAAAAGGTGTGGGGAAAACAGCACCAAACCCATCAGA GGCTCAAACACTATGGGATCCTCCCCTATAGTGAG |
GenBank Accession | BX288858 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:1053513 - go to primer design |
BLAST e Value | 6e-111 |
Hit Clone Code (BAC ID) | T14P8 |
Hit Gene Code | At4g02390 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | poly(ADP-ribose) polymerase |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |