SimpleSearch - Line and FST details
Line specific information
| Line ID | 422A01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N440417) |
| Segregation Analysis | 50:50:44 |
| Confirmed for Hit | At1g33990 |
| Parent of DUPLO pair | 2676 |
| Parent of pair(s) | none |
Gene hit At1g33990
| Sequence (A. th genome BLAST matches underlined) | >01-K017808-022-422-A01-8409 TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCAGAAGAACATATTCT TGCTTTTGAAAGACAATTAACATCTTATCTGTACTTCTGGTGTCATGTTATGGGGTGGGG CTGAACACGGACACTCCAGACATTGATATCTACACTGGTCACGACCCTGTGACAGAATCA GTATCACAGNTTATAACTTTTCATTTCATGATAAAGTTAACATTACCAACAAAAAAGTCA GAAATCTTACAACACTTTTTCACATCTCTTTTCTAATCTTAACACAGAATCTTCTCTTCC TCCACTTTTATAGTAACCAAAATATATAAAAAGTTCCCAAACAATCATTAAAACCGGCAA AAAGGCAAAGACTCAGTCGAAACGATCATTAAATCATATAAAAATGAAACCTTTTGAACT TTTCAAGATTGAAACTTTTATAAGTGTGGAGAAGATTGAGAATCAGTAGTGACTTAACCT GCTTGCCATTAGAAAACGGGTCAGAGAGAGTACGTTTCCTATGGGA |
| GenBank Accession | BX288958 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:12356583 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F12G12 |
| Hit Gene Code | At1g33990 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | methyl esterase 14 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F16A16
| Sequence (A. th genome BLAST matches underlined) | >01-K017846-022-422-A01-8409 TACTATAATACTAGCGTAAATGGACAGTAAAGAGGATCACCTCTTGTTGACTAAACGAGA ATCCAACGTTTACCGTTTCTTAATTTCCAAACATTTGAACGACTCATATGAATTTGAATT TCAATCTATGGGATCCTCCCTATAGTGAGGANTGGGATCCACACTATATCAAGATTTTTT ATTACAATACACAAGGCCAAATGTCTGCATAAGAATTAAAACAAACCCCACCACAAACAA CCACCCCGTGACACCCCACGATACGACCAACACACAGAACACAACGCCTTTCTAAATTCC GTTACACATACCTCGTCCCCCAATTGTACCTTCCCTTCTGTCCCGACCCCTCACACCCAT AAAATACACATCCGAGAACCCACACCCCACCCTATACCCATACAAAAGAAAAGAAGCACA GCCGCGTACAAAGCGCGGGTTACCAACACCGATAAACCGTCGGCAGAACGTACATAAAAC AACCACACCGCCCACCCCAGAAGAAAAAAAACCCGCACACCAAAAAACACCACGACACCC TAAATTTTTATTTATAACATGCAAAGCGACCCCAAAAAAAAAACCGCTATTTCTCACCTA CATAAAGCACCCCCCCCCTACCAAATACACCCTTAACCAACCATACGAA |
| GenBank Accession | BX288959 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:14167220 - go to primer design |
| BLAST e Value | 6e-46 |
| Hit Clone Code (BAC ID) | F16A16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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