SimpleSearch - Line and FST details
Line specific information
| Line ID | 423A09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N440521) |
| Segregation Analysis | 50:49:49 |
| Confirmed for Hit | At4g26830 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6270, 6272, 6308, 6336, 7423, 7428, 7802, 8849, 8856, 87558, 87583, 87602, 87634, 87640, 87648 |
Gene hit At4g26830
| Sequence (A. th genome BLAST matches underlined) | >65-K017809-022-423-A09-8409 TGATCTGANATTTCCCGGAATGAAGCCATTTATCAATTGATCTTACGGCTGATTGTGGAC AATAGAGCTAGATAGGGGATTTTGGGCACTGATATTATGTTCACGGATCTTGACCTATTC GGGATCCTCGGTGTACCTGAGATATTTTTATATAATTCTAACAAAATTATTTTTTCGTTG ATTGCAGGATATGGAAAATGCGAGTTTCCCACCGGACATTGAGGCGGAATAGTTGGCAGC GATTTTCTGTGTTTTTTTTTTTGCCAGATTCTTTAACAACCTGGTTCGCCCATCGGGAGA ATGGACCTCTTTTGCTTGGGGGAGAAAATATGTTAACTTTGTTAAATTATTTCATCCGTT TCACTTGAAAAGGAAACGCCCCCGCAGGGAACCCCTCCCTAAATAGAGGAAAGACACCAA GTTGAAAAGGGTTTCCCTATGGGATCCCCCCTATAGTGAG |
| GenBank Accession | BX289063 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:13494889 - go to primer design |
| BLAST e Value | 4e-53 |
| Hit Clone Code (BAC ID) | F10M23 |
| Hit Gene Code | At4g26830 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | O-Glycosyl hydrolases family 17 protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g19440
| Sequence (A. th genome BLAST matches underlined) | >65-K017847-022-423-A09-8409 TGATCTGANATTTCCCGGACTGAAGCATTTACATTGAATATATCCTATCTGTGTCACTCG TTTTATCCTTGGACACTTGATACGTTGGCACGTAGGGATTCTCGTCCACACACCTGCGTA TGAGGCAAAAGTTATTGACACAGGACATGAACAAAACAACCGGTGTAATATATTTAGTTC ATGTTTTACCTTTCAGGTAGTGGGAGATTTGGGTAAAGCTCACGTAGAATGTTAACAATC TCGGAGTGGTGAACGACACGCTCGACCAAACAATAACGCCCATTAGCTGAAGGGACCTCA AATGCTTGGATGTGCGCATTGGCTACGTCTTTTACATTAACCCATCCGAAACTCAAGTTT GGGAAAGTCTTTGCACCTACATATCGGAAATAAATAAAAGACACCAAGTTGAAAGGGGTT TCTCTAACTATGGGATC |
| GenBank Accession | BX289064 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:6558035 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F7K24 |
| Hit Gene Code | At5g19440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD(P)-binding Rossmann-fold superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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