SimpleSearch - Line and FST details


Line specific information

 
Line ID 424A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N440614)
Segregation Analysis 50:50:36
Confirmed for Hit At4g05180
Parent of DUPLO pair 9469
Parent of pair(s) none

Gene hit At4g05180

 
Sequence (A. th genome BLAST matches underlined) 
>50-K117750-0022-424-A06C-8409
CGGACTGCTGATAGCAGTGACTTCGATGGCTGGCTTACGTGGAGCATCTCAGGCTGTCCT
TGAAGGAAGTTTACAGATCAACGGCTCAAACCGTTTGAACATCTCAAGAGTCTCGGTTGG
GTCTCAGAGAACCGGACTTGTGATCAGGGCTCAGCAGAACGTGTCAGTACCAGAAAGTAG
TCGCCGGTCAGTGATTGGACTCGTGGCGGCTGGTTTAGCCGGTGGTTCATTCGTTAAAGC
TGTTTTCGCCGAAGCTATTCCGATCAAAGTTGGTGGTCCTCCACTTCCTTCCGGTGGCCT
ACGTAAGTAAAACTAATTTAATTAAATTTCACATAATGACTAATACTATTTTTTTGGTTA
AGGAGATAACAAAACGAAATTATTGTGTTATAGCTTGCATGGTTATAATTTAGGTTTTTA
TCAAACGTATCTTTAATCACTTTTGTAAGATAAAAGTTTTAGTAATTAGATTATAGAGAC
CGGTTCTGTTTGATTGATTATGGTTCTGCTTTTGTTTTTGTTTTTTTGTGTGTGAGCAGC
TGGAACAGATAACTCAGACCAAGCAAGAGACTTTTCATTGGCATTGAAAGATAGATTTTA
CATACAACCATTGTCACCAACAGAAGCTGCAGCTAGAGCCAAAGATTCTGCTAAAGAGAT
CATCAACGTTAAGTCATTTATCGACAAAAAAGCTTGGCCCTATGTTCAGAACGATCTCCG
TTTAAGAGCATCGTACCTCCGTTACGATCTCAACACCGTTATCTCCGCTAAGCCTAAGGA
AGAAGAGCAAAGCCTTAAAGATCTCACCGCAAAGCTTTTCCAACCATTGACAACG
GenBank Accession HG968966 [GenBank]
Graphic View Graphic view of gene At4g05180
Predicted Position of Insertion Chr4:2673162 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) C17L7
Hit Gene Code At4g05180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation photosystem II subunit Q-2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX289178 [GenBank]


Last Updated on 10.06.2021 13:37