SimpleSearch - Line and FST details


Line specific information

 
Line ID 424B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N440631)
Segregation Analysis 50:50:44
Confirmed for Hit At1g48970
Parent of DUPLO pair 11850
Parent of pair(s) none

Gene hit At1g48970

 
Sequence (A. th genome BLAST matches underlined) 
>82-K017848-022-424-B11-8409
TGATCTGTNATTTCCCGGACTGAAGCCATTTACATTGAATATATTCCAAAGAAGATATTA
ATATCCGGGCCTACCCAGTCCCTACGGCACTACAGGCTGCCTCATCCGATGTTACTTGGG
GATCACAATTCACCACAAAGGTCTCTTTTGGATAATACAAAACTCAACCATACAAAGAGC
TTATTCAAGAGACACTTAAATAGATTGATAGATTCGTATACATACCAGAAACTTCGGCGA
TCTTCTTTTTCCCTTGAGAAGCAGACGTGGTCGCAATTTTGGTTTCAGATTCCTGAGGAG
CTCTAACAGCTATGGGAT
GenBank Accession BX289203 [GenBank]
Graphic View Graphic view of gene At1g48970
Predicted Position of Insertion Chr1:18116802 - go to primer design
BLAST e Value 1e-151
Hit Clone Code (BAC ID) F27K7
Hit Gene Code At1g48970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NagB/RpiA/CoA transferase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g48710

 
Sequence (A. th genome BLAST matches underlined) 
>82-K017810-022-424-B11-8409
TGATCTGANATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGAACAAACCCCAAT
TCCCATGGAGTTTTTTGCAAAAGAAACACTGAGCATATCAAAACCCAAAAGCAGCCACCA
CGTGAGTGGGAGAGAGACAGTTGAGCCACCATTGTTTATTGTTGTCCCCTTCGTACTGTC
ACCGGAGCAGTCGTAGCCAATCTTCGAGGCGGTGTAAGGGTAAGAAAACCCTATGGGATC
CTCCCCCTATAGTGAGACACGTCAAGGAAGCTGCATCTCTATAATGGGTAGGAGCAGTTA
GCCAGTTACTGTTTCAGAGGTGTTTAAATGTGAAGGATGAAATTGACTATGGGATCCTCC
CTATAGTGAG
GenBank Accession BX289202 [GenBank]
Graphic View Graphic view of gene At5g48710
Predicted Position of Insertion Chr5:19756039 - go to primer design
BLAST e Value 2e-80
Hit Clone Code (BAC ID) K24G6
Hit Gene Code At5g48710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ubiquitin-like superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37