SimpleSearch - Line and FST details
Line specific information
| Line ID | 424C01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N440633) |
| Segregation Analysis | 50:50:47 |
| Confirmed for Hit | At2g45290 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 959, 92778 |
Gene hit At3g47470
| Sequence (A. th genome BLAST matches underlined) | >03-K017810-022-424-C01-8409 TATCATGAGATTTCCNGGACATGAAGCCATTTACATTGATCAAGAAGATCCTTTGATCTT TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG ATTATCAAAAAGGATCTTCACCTATGGGATCCTCCCTATAGTGAGACTAAACCGGTATCG GACTGTCCTAAGCTAACCAAATCGATTACCATGTTGGTTCCGGATGTGTTAAACCGAAAT TGAATGTAGTTGGCAAAACATTACCTGCCGGTGAGATAATTAGGCGATGCCAAACCGGGC AACCATTCTCCTTTCTTATCTTCAACCTTGAACGACTACCTTTTGGCCGATGAACCGATC GATGTAAACGACAATTCGCGGTTCAACCTACCGGAAGAACCGGTGAGGAATCTTGGCTTT GAAGTACAAGGTCGGAAAATCGAGGCCGAGGCATGAGTAATGACAGTAGCCATTATCCCT ATGGGATCTCCCCTAATAATGAGATGCCACTGGTGCGTGGANAAGTGGATTTGAGAGCAG AGAATGCTGGTATAGAGACGCAGTTTTCCGAGCCATTGTGAGAGATGGCTCGTGTAAGGA GAGCTTGTGAGAGC |
| GenBank Accession | BX289205 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17494466 - go to primer design |
| BLAST e Value | 2e-159 |
| Hit Clone Code (BAC ID) | F1P2 |
| Hit Gene Code | At3g47470 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | light-harvesting chlorophyll-protein complex I subunit A4 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At2g45290
| Sequence (A. th genome BLAST matches underlined) | >03-K017848-022-424-C01-8409 TGATCTGTAATTTCCCGGACATGAAGCCTTTACCTTGATTTTTGCGAGCTTGAGATTTAG AATTGTACAACCAACTTAAGATTTGCTGAACCAGTGTTGAAGTTTTTTATTAGGAGGAAG ATTTGAAGAGCTTCCGTCAATGGGGAAGTAAGACTCCAGGACATCCTGAGAATTTTGAGA CTCCTGGTGTTGAAGCCACTACTGGTTAGTTAGATTTTCTCTGCTTCTTTTGTGTGTTTT AGTTGATGTTGATCTTTTGTAATATAGCATTGCTTGTATTTGCCAACATGCAGGTCCTCT TGGACAAGGTATTGCAAATGCTGTTGGTTTAGCTCTTGCGGAGAAGCATTTGGCTGCTAT GGGATCCTCCCTAAATAGTGAGACCCGACTTATCNAACCAGGACGAATCGAAACTTGTCA CGATTGCCTCTACGGCGGCTGCACGAACCAGAGGGCGGAGAGAGTGACTGATCGTGGAGG CGTTTCGTCGACGGGAAGAGATGGTGCCACTGGTGCGTGGAGAAATGGATTTGAGAGCAG AGAAAGCTGGTATAGAGACGCAGTTTTCAGAGCCATTGTGAGAGATGGCTCGTGTAAGGA GAGCTTGTGAGAGCGCTATGGGAT |
| GenBank Accession | BX289206 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:18673337 - go to primer design |
| BLAST e Value | 1e-170 |
| Hit Clone Code (BAC ID) | F4L23 |
| Hit Gene Code | At2g45290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Transketolase |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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