SimpleSearch - Line and FST details


Line specific information

 
Line ID 424F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N440672)
Segregation Analysis 50:50:39
Confirmed for Hit At5g18620
Parent of DUPLO pair 2414
Parent of pair(s) none

Gene hit At5g18620

 
Sequence (A. th genome BLAST matches underlined) 
>30-K017848-022-424-F04-8409
GGACTGAAGCACTTGGTAGATTTACATTACAAGTAGATCATTGCAGAATGTGGCAATTGG
CTTAGTTATTTTCTCTTTACATGTTCTTGTTTCTATGGGATCTNCCGTATAGTGAGAGGA
TAGGGAACCCGCCCTACCGAGTGATTTTGAATTCCCAAATGTAGAGGGCCGCAGCGATAT
TATATAGGGAGAGACCCTCCCTGTAGAGAGAGAAANNCCCCCTANAGTGAGAAAGGGGAA
GCCCCCCCCCAATGGAGACACGCGCGCAGCGCCTCCATGGAGGGGAGTCGCCTGGGGGGG
CGAGAGGGGGAAGGCGAGAAGGCCGGAAAAAAGAGGAAAGGTCTTTTTTTTGGACCCCCC
CCCCCCAGAGGTCCGCGCTTTATTATACACGGCGACAGCGGGGCACGCGCAAAAAAAAAA
AAAGCAAGCGAGGGGGGGGACGGGAAAAAACGCGGCGCAAAAAACAACCGGGGAAACGGA
GAGAGAGAAAAAGAGGGGGGGGGGGGGCGGGAACAGGAGGGGGGGGGGGGGAAAACAAAA
AAGGGGACCGACCGCCCCGCGCAAACAGGCCACCGGCGGGCGCGGAAGCAACCACCGCAG
GGGGGGGCGCACAGAAGACACGACAACAACCGGGGGGGGGCGGGGAGAAAAAGGGAGGGG
CGGGCCGCCAAGCGCGACGCCCACAAAACAACGGAGAGGGGGACAGCCGGGCGCCCAGGC
ACGGAAATAGGCGCACGGCGGAGCCGCCGCGCAAAGCGCGGTAGAACGCAACCACCGAAG
GAAGAGGGGGCGCACGAGGGGGCACACACACGCGCCGCGCAAGGGGAGACGGCGCGGACG
CGG
GenBank Accession BX289260 [GenBank]
Graphic View Graphic view of gene At5g18620
Predicted Position of Insertion Chr5:6199444 - go to primer design
BLAST e Value 2e-27
Hit Clone Code (BAC ID) T1A4
Hit Gene Code At5g18620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chromatin remodeling factor17
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37