SimpleSearch - Line and FST details


Line specific information

 
Line ID 425B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N440725)
Segregation Analysis 50:42:21
Confirmed for Hit At3g44370
Parent of DUPLO pair 481
Parent of pair(s) none

Gene hit At3g44370

 
Sequence (A. th genome BLAST matches underlined) 
>66-K017811-022-425-B09-8409
TATCGTTTTATTCTCATTGATGTGAAAATACTCAAAGAAATGTTCGCTCATGGCTTCAGG
GGAAGACATCAGAAGGAATCACACACCTTGAAAGAGTAGCAAACATGAAAGAGCCCGACG
ATCCTAAGAGCAAAGCTCATTACTTGGATGCATTGGTACTCTACTCAAGGTAAAAAACAA
AAACAAGTAAATTATTCTCATGAGTTTGGTCTTGTGACATGTAATTTCAGAAATACTAAG
AGAATATGTGAATCTGAGAATTGTTGTTCTTATCATTATGTGTGCAGTGCGATATTCAAC
GAAGGAAGGAGAGAGGAAGCAGCAAAGTATTTGAGAAGAGTGGTGGCTTATGATCCTTCC
TTCAGTGAATTGTTGAAACAATGCGAAGAAGATGATACCATTCCCACTTCTTCTTCATCT
AATTCTACCAGCAAAACTTCATAAGTTTTTTAATTTTTTTTCGTATTGGTATCTTTCTTC
CATCCTTTACTGATTTTCGTCTGGGGTTGCACCATTTTCTTCTTTTTTTGGTTAAATCGT
GTGGATAGATTATTTCTTTTACTATATTTGGATAAAGATGTATACCGGTATGATTATACC
AGAGAAGAAAAGCCGATAGACTTATTTACTTTCAAAATGAAAACGGCCTTGATACCCACA
TTAAAATTCCACATGCCTTTGACTTGAAAAAAAAGAAGTTCCTGAAGTAATATGTGATTG
GATGGGAGAAAGAGAAAACATCTTTGTCAACAAAATGTTACGTTTCTCTACCA
GenBank Accession BX289315 [GenBank]
Graphic View Graphic view of gene At3g44370
Predicted Position of Insertion Chr3:16030979 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T22K7
Hit Gene Code At3g44370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37